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Cofit
Protein
Homologs
Fitness for 5 genes in
Hydrogenophaga sp. GW460-11-11-14-LB1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF3419 and GFF3420 overlap by 4 nucleotides
GFF3420 and GFF3421 are separated by 268 nucleotides
GFF3421 and GFF3422 are separated by 137 nucleotides
GFF3422 and GFF3423 are separated by 125 nucleotides
GFF3419 - Ornithine carbamoyltransferase (EC 2.1.3.3), at 303,658 to 304,599
GFF3419
GFF3420 - Acetylornithine aminotransferase (EC 2.6.1.11), at 304,596 to 305,795
GFF3420
GFF3421 - Histone acetyltransferase HPA2 and related acetyltransferases, at 306,064 to 306,384
GFF3421
GFF3422 - SSU ribosomal protein S20p, at 306,522 to 306,821
GFF3422
GFF3423 - Proposed peptidoglycan lipid II flippase MurJ, at 306,947 to 308,506
GFF3423
Group
Condition
GFF3419
GFF3420
GFF3421
GFF3422
GFF3423
carbon source
Ying_sugar7 rep C; time point 3
N.D.
-2.4
+0.0
N.D.
N.D.
carbon source
Ying_Nucleobase14 rep B; time point 2
N.D.
-2.3
+0.3
N.D.
N.D.
carbon source
Ying_sugar7 rep A; time point 3
N.D.
-2.1
+0.2
N.D.
N.D.
carbon source
Ying_Nucleobase14 rep C; time point 2
N.D.
-2.0
+0.1
N.D.
N.D.
carbon source
Ying_Others16 rep B; time point 3
N.D.
-2.2
+0.3
N.D.
N.D.
carbon source
Ying_Nucleobase14 rep A; time point 2
N.D.
-2.2
+0.3
N.D.
N.D.
carbon source
Ying_Nucleobase14 rep C; time point 1
N.D.
-1.6
-0.2
N.D.
N.D.
carbon source
Ying_AminoAcid20 rep B; time point 2
N.D.
-1.3
-0.1
N.D.
N.D.
carbon source
Ying_Nucleobase14 rep A; time point 1
N.D.
-1.6
+0.3
N.D.
N.D.
carbon source
Ying_sugar7 rep C; time point 2
N.D.
-1.5
+0.2
N.D.
N.D.
carbon source
Ying_sugar7 rep A; time point 2
N.D.
-1.3
+0.1
N.D.
N.D.
carbon source
Ying_sugar7 rep B; time point 2
N.D.
-1.1
+0.2
N.D.
N.D.
carbon source
Ying_all64 rep A; time point 3
N.D.
-1.0
+0.0
N.D.
N.D.
carbon source
Ying_AminoAcid20 rep B; time point 3
N.D.
-0.8
-0.1
N.D.
N.D.
carbon source
Ying_sugar7 rep B; time point 1
N.D.
-0.9
+0.1
N.D.
N.D.
carbon source
Ying_Nucleobase14 rep B; time point 1
N.D.
-1.2
+0.3
N.D.
N.D.
carbon source
Ying_sugar7 rep C; time point 1
N.D.
-0.8
+0.0
N.D.
N.D.
carbon source
Ying_all64 rep B; time point 3
N.D.
-0.8
-0.0
N.D.
N.D.
carbon source
Ying_AminoAcid20 rep A; time point 3
N.D.
-0.8
+0.2
N.D.
N.D.
carbon source
Ying_sugar7 rep A; time point 1
N.D.
-0.5
-0.1
N.D.
N.D.
carbon source
Ying_AminoAcid20 rep C; time point 2
N.D.
-0.8
+0.3
N.D.
N.D.
carbon source
Ying_AminoAcid20 rep C; time point 3
N.D.
-0.6
+0.1
N.D.
N.D.
carbon source
Ying_all64 rep B; time point 2
N.D.
-0.5
+0.2
N.D.
N.D.
carbon source
Ying_all64 rep A; time point 2
N.D.
-0.5
+0.2
N.D.
N.D.
carbon source
Ying_all64 rep A; time point 1
N.D.
-0.6
+0.3
N.D.
N.D.
carbon source
Ying_all64 rep C; time point 1
N.D.
-0.5
+0.2
N.D.
N.D.
carbon source
Ying_Others16 rep C; time point 1
N.D.
-0.3
+0.2
N.D.
N.D.
carbon source
Ying_Others16 rep A; time point 3
N.D.
+0.7
-0.0
N.D.
N.D.
carbon source
Ying_all64 rep C; time point 2
N.D.
+2.3
-0.3
N.D.
N.D.
carbon source
Ying_all64 rep C; time point 3
N.D.
+2.4
-0.1
N.D.
N.D.
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