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Protein
Homologs
Fitness for 5 genes in
Pseudomonas simiae WCS417
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500 nt
PS417_17475 and PS417_17480 are separated by 186 nucleotides
PS417_17480 and PS417_17485 are separated by 30 nucleotides
PS417_17485 and PS417_17490 overlap by 4 nucleotides
PS417_17490 and PS417_17495 overlap by 4 nucleotides
PS417_17475: PS417_17475 - histidine kinase, at 3,817,386 to 3,818,648
_17475
PS417_17480: PS417_17480 - branched-chain amino acid ABC transporter substrate-binding protein, at 3,818,835 to 3,820,007
_17480
PS417_17485: PS417_17485 - membrane protein, at 3,820,038 to 3,820,997
_17485
PS417_17490: PS417_17490 - ABC transporter ATP-binding protein, at 3,820,994 to 3,821,734
_17490
PS417_17495: PS417_17495 - multidrug ABC transporter permease, at 3,821,731 to 3,822,522
_17495
Group
Condition
PS417
_17475
PS417
_17480
PS417
_17485
PS417
_17490
PS417
_17495
carbon source
Gly-Glu (C)
+0.1
-3.9
-4.1
-6.3
-3.4
carbon source
Gly-Glu (C)
-0.1
-6.1
-4.1
-3.7
-3.6
carbon source
Ethanol (C)
-1.7
-2.3
-2.8
-3.9
-2.6
carbon source
Ethanol (C)
-1.7
-2.5
-2.3
-2.0
-2.5
carbon source
acetate (C)
-0.7
-1.8
-2.8
-1.6
-2.6
carbon source
acetate (C)
-0.9
-1.3
-1.6
-3.2
-2.1
carbon source
Putrescine (C)
-0.2
-2.3
-2.3
-2.0
-2.1
carbon source
Fumarate (C)
-0.7
-2.0
-1.8
-2.0
-2.0
carbon source
Fumarate (C)
-0.6
-2.1
-1.7
-2.4
-1.7
carbon source
Putrescine (C)
-0.1
-2.5
-2.2
-1.1
-2.0
carbon source
NAG (C)
-0.0
-1.5
-1.7
-2.4
-1.7
carbon source
D-Glucose-6-Phosphate (C)
-0.1
-1.7
-2.1
-1.7
-1.4
carbon source
NAG (C)
+0.1
-1.8
-1.9
-1.0
-1.6
carbon source
D-Glucose-6-Phosphate (C)
+0.0
-1.5
-1.2
-1.2
-1.0
carbon source
L-Citrulline (C)
+0.2
-1.1
-1.4
-1.8
-0.8
carbon source
Uridine (C)
+0.0
-1.2
-1.3
-0.9
-1.2
carbon source
Uridine (C)
-0.2
-1.2
-1.1
-0.4
-1.3
carbon source
D-Sorbitol (C)
-0.1
-1.0
-1.2
-1.3
-0.6
carbon source
L-Citrulline (C)
+0.1
-1.1
-1.4
-0.8
-0.9
carbon source
octanoate (C)
-0.0
-0.9
-1.1
-1.0
-1.0
carbon source
D-Sorbitol (C)
-0.1
-0.8
-0.7
-1.2
-1.1
carbon source
D-Fructose (C)
-0.3
-1.0
-0.9
-0.8
-0.8
carbon source
Deoxyribonucleic from herring sperm 5 mg/mL (C)
+0.5
-1.0
-1.3
-0.9
-0.9
carbon source
D-Fructose (C)
-0.1
-0.7
-0.8
-1.3
-0.8
carbon source
octanoate (C)
+0.1
-0.9
-1.2
-0.4
-1.2
soil
soil sample 4; outgrowth in LB
+0.3
-0.8
-0.6
-2.3
-0.2
carbon source
L-Leucine (C)
-0.1
-0.9
-1.0
-0.6
-0.8
carbon source
L-Tryptophan (C)
-0.0
-0.7
-1.3
-0.6
-0.8
carbon source
Cytidine (C)
-0.3
-1.0
-1.1
+0.2
-1.1
carbon source
Deoxyribonucleic from herring sperm 5 mg/mL (C)
+0.2
-0.8
-1.2
-0.3
-0.9
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