Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3412 and GFF3413 overlap by 11 nucleotidesGFF3413 and GFF3414 are separated by 212 nucleotidesGFF3414 and GFF3415 are separated by 10 nucleotidesGFF3415 and GFF3416 are separated by 41 nucleotides GFF3412 - Rrf2 family transcriptional regulator, group III, at 236,433 to 236,894 GFF3412 GFF3413 - Thioredoxin reductase (EC 1.8.1.9), at 236,884 to 237,786 GFF3413 GFF3414 - Fumarylacetoacetase (EC 3.7.1.2), at 237,999 to 239,324 GFF3414 GFF3415 - Cyclase, at 239,335 to 240,141 GFF3415 GFF3416 - Alkanesulfonates transport system permease protein, at 240,183 to 240,962 GFF3416
Group Condition GFF3412 GFF3413 GFF3414 GFF3415 GFF3416
complex community Community=arabino-guar; Passage=4 N.D. -0.3 +0.1 -0.8 -2.2
complex community Community=Kojac gum; Passage=4 N.D. -0.5 -0.7 -0.7 -0.6
complex community Community=Locust bean gum; Passage=4 N.D. -0.1 -0.1 -0.6 -0.4
complex community Community=Locust bean gum; Passage=4 N.D. -0.1 +0.3 -0.8 -0.6
complex community Community=Locust bean gum; Passage=4 N.D. -0.5 -0.5 -0.7 +0.5
complex community Community=guar; Passage=4 N.D. -0.1 -0.2 -0.6 +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. +0.2 +0.2 +0.1 -0.9
complex community Community=arabino-guar; Passage=4 N.D. -0.5 -0.3 -0.5 +0.9
complex community Community=guar; Passage=4 N.D. -0.9 -0.1 -0.2 +0.9
phage phage_bap4 N.D. +0.3 +0.0 -0.1 -0.6
complex community Community=Locust bean gum; Passage=4 N.D. +0.1 -0.3 -0.6 +0.7
complex community Community=arabino-guar; Passage=4 N.D. +0.3 +0.2 -0.3 -0.2
complex community Community=guar; Passage=4 N.D. +0.3 +0.3 -0.2 +0.0
vitamin M9 with Supernatant from Cyptococcus N.D. -0.2 -0.1 +0.0 +0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.1 -0.1 -0.1 +0.7
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.1 +0.0 -0.1 +0.8
vitamin M9 with Supernatant from Cyptococcus N.D. +0.2 +0.1 -0.1 +0.5
vitamin M9 with Supernatant from Cyptococcus N.D. +0.1 -0.1 +0.3 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. +0.2 -0.1 +0.1 +0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. +0.1 -0.2 -0.2 +1.1
vitamin M9 with Supernatant from Cyptococcus N.D. +0.1 +0.0 -0.0 +0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. +0.3 +0.1 +0.3 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. +0.1 -0.0 +0.2 +0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. +0.0 -0.0 -0.0 +1.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. -0.0 +0.2 +0.2 +0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.1 +0.1 +0.2 +0.6
phage phage_bap4 N.D. +0.4 +0.0 +0.1 +0.6
complex community Community=arabino-guar; Passage=4 N.D. +0.5 -0.2 -0.2 +1.0
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.4 +0.1 +0.0 +0.7
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. +0.1 +0.1 +0.1 +0.9
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