Fitness for 5 genes in Pseudomonas simiae WCS417

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500 ntPS417_17445 and PS417_17450 are separated by 9 nucleotidesPS417_17450 and PS417_17455 are separated by 3 nucleotidesPS417_17455 and PS417_17460 are separated by 300 nucleotidesPS417_17460 and PS417_17465 are separated by 78 nucleotides PS417_17445: PS417_17445 - sulfur oxidation protein SoxZ, at 3,811,751 to 3,812,500 _17445 PS417_17450: PS417_17450 - amino acid ABC transporter substrate-binding protein, at 3,812,510 to 3,813,385 _17450 PS417_17455: PS417_17455 - cytochrome C, at 3,813,389 to 3,813,850 _17455 PS417_17460: PS417_17460 - Quinoprotein ethanol dehydrogenase QedA (EC 1.1.2.8) (from data), at 3,814,151 to 3,815,998 _17460 PS417_17465: PS417_17465 - hypothetical protein, at 3,816,077 to 3,816,724 _17465
Group Condition PS417_17445 PS417_17450 PS417_17455 PS417_17460 PS417_17465
carbon source Gly-Glu (C) -0.6 -4.2 -2.3 -0.2 N.D.
carbon source Gly-Glu (C) +0.1 -5.2 -1.8 -0.3 N.D.
carbon source Ethanol (C) +0.4 -2.6 -2.4 -2.1 N.D.
carbon source Ethanol (C) +0.5 -2.1 -2.2 -2.3 N.D.
carbon source acetate (C) +0.2 -2.1 -2.5 -0.8 N.D.
carbon source Fumarate (C) +0.1 -1.9 -1.7 -0.9 N.D.
carbon source Fumarate (C) +0.3 -2.0 -1.8 -0.8 N.D.
carbon source Putrescine (C) -0.4 -1.8 -1.7 -0.1 N.D.
carbon source Putrescine (C) +0.1 -1.8 -2.1 -0.1 N.D.
carbon source acetate (C) +0.7 -2.2 -1.7 -0.7 N.D.
carbon source Carbon source L-Citrulline 10 mM -0.4 -0.4 -1.7 -1.0 N.D.
carbon source Carbon source L-Citrulline 10 mM -0.2 -0.4 -1.6 -1.1 N.D.
carbon source NAG (C) +0.0 -1.6 -1.4 -0.1 N.D.
carbon source NAG (C) -0.0 -1.4 -1.5 -0.1 N.D.
carbon source D-Glucose-6-Phosphate (C) +0.2 -1.7 -1.1 -0.3 N.D.
carbon source L-Arginine (C) +0.1 -0.2 -1.2 -1.2 N.D.
carbon source Carbon source L-Citrulline 5 mM +0.4 -0.7 -1.0 -1.1 N.D.
carbon source Carbon source L-Citrulline 5 mM +0.1 -0.2 -0.8 -1.4 N.D.
carbon source Deoxyribonucleic from herring sperm 5 mg/mL (C) +0.3 -1.6 -1.0 -0.0 N.D.
phage Wcs_1 -1.1 -0.7 -0.5 +0.0 N.D.
carbon source L-Arginine (C) +0.4 -0.0 -1.1 -1.4 N.D.
root root sample 6; outgrowth in LB -0.9 -0.7 -0.7 +0.3 N.D.
carbon source D-Sorbitol (C) +0.2 -1.1 -0.5 -0.5 N.D.
carbon source D-Glucose-6-Phosphate (C) +0.3 -0.8 -0.9 -0.4 N.D.
carbon source octanoate (C) +0.4 -0.8 -1.0 -0.3 N.D.
seeds Growth on radish seeds for 24 hours +0.5 -1.2 -0.4 -0.5 N.D.
phage P. simiae ORA MOI 1 -0.3 -0.8 +0.8 -0.4 N.D.
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -1.1 +1.0 +0.0 N.D.
stress methylglyoxal 0.032 vol% +1.0 -1.1 +0.5 -0.7 N.D.
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +0.3 +1.4 +0.2 N.D.
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