Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_17425	PS417_17430	PS417_17435	PS417_17440	PS417_17445
carbon source	Gly-Glu (C)	-3.9	-0.7	-3.9	-0.1	-0.6
carbon source	Gly-Glu (C)	-3.6	-0.4	-3.8	+0.4	+0.1
carbon source	Ethanol (C)	-2.9	-0.4	-2.4	+0.4	+0.5
carbon source	Ethanol (C)	-2.3	-0.3	-2.5	+0.3	+0.4
carbon source	Fumarate (C)	-2.0	-0.0	-1.9	-0.2	+0.1
carbon source	Fumarate (C)	-2.2	-0.3	-2.1	+0.6	+0.3
carbon source	acetate (C)	-1.8	-0.1	-2.0	+0.2	+0.2
carbon source	Putrescine (C)	-0.9	-0.1	-2.1	-0.0	-0.4
carbon source	acetate (C)	-2.4	-0.3	-1.7	+0.9	+0.7
phage	P. simiae Grant Run MOI 0.1	-0.0	-1.1	-0.1	-0.9	-0.6
carbon source	NAG (C)	-1.1	-0.2	-1.2	-0.1	-0.0
phage	P. simiae Grant Run MOI 10	-0.5	-0.9	+0.1	-0.8	-0.6
soil	soil sample 3; outgrowth in LB	-0.6	-0.3	+0.3	-2.0	+0.1
carbon source	D-Glucose-6-Phosphate (C)	-0.9	-0.5	-1.6	+0.5	+0.2
carbon source	Putrescine (C)	-0.5	-0.1	-1.9	+0.2	+0.1
carbon source	Deoxyribonucleic from herring sperm 5 mg/mL (C)	-0.8	-0.4	-1.0	-0.2	+0.3
carbon source	NAG (C)	-1.0	+0.0	-1.4	+0.8	+0.0
seeds	Growth on radish seeds for 24 hours	-1.1	+0.4	-0.0	-1.0	+0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.2	-0.7	+0.0	-0.7	+0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.5	-1.5	+0.1	-0.1	+0.4
carbon source	Carbon source L-Citrulline 10 mM	-1.0	+0.1	-0.5	+1.3	-0.4
carbon source	D-Fructose (C)	-0.6	+0.1	-0.8	+0.8	+0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.9	+0.0	-0.1	-1.2	+0.4
seeds	Growth on radish seeds for 72 hours	-1.1	+0.2	-0.3	+2.2	-0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.4	-0.8	+0.0	+1.1	+0.5
carbon source	Trisodium citrate (C)	-0.4	+0.2	-0.2	+0.6	+1.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.3	+0.4	-0.2	+1.1	+0.5
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.2	+0.4	-0.0	+1.7	-0.5
stress	Gentamicin 0.008 mg/ml	+0.3	+0.0	+0.1	-0.4	+2.0
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.8	-0.2	+0.3	+2.8	+0.1