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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF3405 and GFF3406 are separated by 132 nucleotides
GFF3406 and GFF3407 are separated by 10 nucleotides
GFF3407 and GFF3408 are separated by 72 nucleotides
GFF3408 and GFF3409 are separated by 184 nucleotides
GFF3405 - Benzoyl-CoA oxygenase component B, at 228,516 to 229,943
GFF3405
GFF3406 - Benzoyl-CoA oxygenase component A, at 230,076 to 231,362
GFF3406
GFF3407 - MaoC domain protein, at 231,373 to 231,816
GFF3407
GFF3408 - hypothetical protein, at 231,889 to 232,320
GFF3408
GFF3409 - Probable lipoprotein signal peptide, at 232,505 to 233,539
GFF3409
Group
Condition
GFF3405
GFF3406
GFF3407
GFF3408
GFF3409
complex community
Community=guar; Passage=4
-0.3
-4.0
-0.1
N.D.
-0.5
complex community
Community=guar; Passage=4
-0.5
-3.5
-0.5
N.D.
-0.3
complex community
Community=Locust bean gum; Passage=4
+0.1
-3.3
-0.0
N.D.
-1.4
complex community
Community=guar; Passage=4
-0.5
-3.5
-0.1
N.D.
-0.2
complex community
Community=arabino-guar; Passage=4
-0.2
-3.8
-0.1
N.D.
+0.2
complex community
Community=Locust bean gum; Passage=4
-0.0
-3.0
-0.4
N.D.
-0.1
complex community
Community=arabino-guar; Passage=4
-0.3
-3.5
+0.1
N.D.
+0.3
complex community
Community=Locust bean gum; Passage=4
-0.0
-3.9
+0.4
N.D.
+0.2
complex community
Community=guar; Passage=4
-0.0
-3.6
+0.5
N.D.
+0.0
complex community
Community=Locust bean gum; Passage=4
+0.1
-2.6
+0.1
N.D.
-0.7
complex community
Community=arabino-guar; Passage=4
-0.9
-2.8
+0.3
N.D.
+0.4
complex community
Community=arabino-guar; Passage=4
-0.1
-3.3
+0.1
N.D.
+0.2
complex community
Community=Kojac gum; Passage=4
-0.5
-2.8
+0.3
N.D.
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.0
-1.2
-0.1
N.D.
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.0
-0.9
-0.3
N.D.
-0.2
vitamin
M9 with Supernatant from Cyptococcus
-0.1
-1.1
-0.1
N.D.
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.2
-0.8
-0.2
N.D.
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.1
-0.9
-0.2
N.D.
+0.1
vitamin
M9 with Supernatant from Cyptococcus
-0.2
-0.8
-0.2
N.D.
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.0
-0.9
-0.2
N.D.
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.0
-1.1
+0.1
N.D.
-0.0
vitamin
M9 with Supernatant from Cyptococcus
-0.1
-0.9
-0.0
N.D.
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.0
-0.8
-0.1
N.D.
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.1
-1.0
+0.1
N.D.
+0.0
vitamin
M9 with Supernatant from Cyptococcus
-0.1
-0.9
-0.2
N.D.
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.2
-0.9
+0.1
N.D.
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.2
-0.8
-0.0
N.D.
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.0
-0.9
-0.0
N.D.
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.1
-0.8
+0.1
N.D.
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.0
-0.8
+0.1
N.D.
+0.2
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