Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF3399 and GFF3400 overlap by 1 nucleotidesGFF3400 and GFF3401 are separated by 4 nucleotidesGFF3401 and GFF3402 overlap by 4 nucleotidesGFF3402 and GFF3403 overlap by 8 nucleotides GFF3399 - Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1), at 283,805 to 284,854 GFF3399 GFF3400 - High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1), at 284,854 to 285,738 GFF3400 GFF3401 - Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3), at 285,743 to 287,683 GFF3401 GFF3402 - Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1), at 287,680 to 288,468 GFF3402 GFF3403 - Alpha-methylacyl-CoA racemase (EC 5.1.99.4), at 288,461 to 289,504 GFF3403
Group Condition GFF3399 GFF3400 GFF3401 GFF3402 GFF3403
carbon source Ying_Others16 rep A; time point 3 -0.1 +0.0 +0.1 -0.8 -0.4
carbon source Ying_sugar7 rep C; time point 3 +0.1 -0.1 +0.1 -0.7 -0.5
carbon source Ying_OrganicAcid7 rep A; time point 3 +0.2 +0.2 +0.2 -0.9 -0.5
carbon source Ying_Others16 rep C; time point 3 +0.3 -0.0 +0.2 -1.1 -0.0
carbon source Ying_AminoAcid20 rep B; time point 1 -0.2 -0.5 +0.3 -0.1 +0.3
carbon source Ying_Others16 rep C; time point 2 -0.4 +0.2 +0.1 +0.4 -0.1
carbon source Ying_all64 rep C; time point 3 +0.6 -0.5 -0.3 -0.0 +0.8
carbon source Ying_Nucleobase14 rep C; time point 1 +0.5 +0.5 +0.0 +0.4 -0.8
carbon source Ying_sugar7 rep A; time point 3 +0.2 -0.2 +0.3 +0.4 -0.1
carbon source Ying_AminoAcid20 rep B; time point 2 -0.1 -0.3 +0.1 +1.0 +0.0
carbon source Ying_sugar7 rep C; time point 2 -0.1 +0.5 +0.3 +0.2 -0.2
carbon source Ying_all64 rep B; time point 3 -0.1 +0.1 +0.6 +0.4 -0.3
carbon source Ying_OrganicAcid7 rep A; time point 2 -0.2 -0.1 +0.3 +0.8 +0.0
carbon source Ying_AminoAcid20 rep A; time point 2 +0.2 +0.3 +0.5 -0.3 +0.0
carbon source Ying_all64 rep C; time point 2 +0.6 +0.0 -0.2 +0.5 -0.0
carbon source Ying_sugar7 rep B; time point 1 -0.1 +0.0 +0.2 +0.7 +0.2
carbon source Ying_Nucleobase14 rep A; time point 1 +0.3 +0.4 -0.1 +0.0 +0.4
carbon source Ying_sugar7 rep B; time point 2 -0.2 -0.2 +0.7 +0.6 +0.0
carbon source Ying_Others16 rep B; time point 2 +0.4 +0.1 -0.1 +0.6 +0.1
carbon source Ying_Nucleobase14 rep B; time point 1 +0.3 +0.5 -0.1 -0.0 +0.4
carbon source Ying_Others16 rep C; time point 1 +0.2 +0.1 +0.3 +0.4 +0.1
carbon source Ying_OrganicAcid7 rep C; time point 1 -0.1 +0.5 -0.0 +0.5 +0.3
carbon source Ying_Others16 rep B; time point 1 -0.0 +0.4 +0.4 +0.2 +0.3
carbon source Ying_sugar7 rep C; time point 1 +0.1 +0.2 -0.1 +0.9 +0.2
carbon source Ying_all64 rep A; time point 3 -0.1 +0.5 +0.1 +1.0 +0.0
carbon source Ying_Nucleobase14 rep A; time point 2 -0.0 +0.6 +0.2 +0.6 +0.1
carbon source Ying_Nucleobase14 rep C; time point 2 +0.6 +0.1 -0.2 +0.7 +0.3
carbon source Ying_AminoAcid20 rep A; time point 1 +0.3 +0.1 +0.3 +0.7 +0.1
carbon source Ying_all64 rep A; time point 2 +0.3 -0.1 -0.0 +1.1 +0.3
carbon source Ying_OrganicAcid7 rep A; time point 1 +0.1 +0.3 +0.6 +0.4 +0.4
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