Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3398 and GFF3399 are separated by 142 nucleotidesGFF3399 and GFF3400 are separated by 30 nucleotidesGFF3400 and GFF3401 are separated by 124 nucleotidesGFF3401 and GFF3402 are separated by 17 nucleotides GFF3398 - benzoate degradation ring-cleavage hydrolase, at 220,850 to 221,659 GFF3398 GFF3399 - Benzoate--CoA ligase (EC 6.2.1.25), at 221,802 to 223,349 GFF3399 GFF3400 - Benzaldehyde dehydrogenase, at 223,380 to 224,930 GFF3400 GFF3401 - P-hydroxylaminobenzoate lyase, at 225,055 to 225,546 GFF3401 GFF3402 - no description, at 225,564 to 225,713 GFF3402
Group Condition GFF3398 GFF3399 GFF3400 GFF3401 GFF3402
complex community Community=arabino-guar; Passage=4 -1.0 -0.2 -0.0 -2.7 -1.1
complex community Community=guar; Passage=4 -0.7 +0.0 -0.3 -2.7 -0.6
complex community Community=arabino-guar; Passage=4 +0.3 +0.1 +0.1 -2.7 -1.5
complex community Community=Locust bean gum; Passage=4 +0.0 -0.2 +0.1 -2.5 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 +0.0 -0.3 -1.8 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 +0.0 -0.1 -2.0 -0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.3 +0.0 -0.1 -0.7 -1.4
phage phage_bap4 -0.2 +0.1 +0.1 -2.3 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.5 +0.0 -0.1 -0.9 -1.3
no phage control no phage control -0.1 +0.0 -0.1 -1.0 -0.2
phage phage_bap4 -0.1 +0.1 -0.2 -1.1 +0.0
complex community Community=Locust bean gum; Passage=4 -0.6 +0.1 -0.1 +1.7 -2.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 +0.0 -0.1 +0.3 -1.6
complex community Community=guar; Passage=4 +0.2 -0.1 +0.2 -2.5 +1.0
complex community Community=Locust bean gum; Passage=4 -0.1 +0.3 +0.0 -2.5 +1.1
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.1 -0.1 -0.5 -0.5
phage phage_bap4 -0.3 +0.1 -0.0 -1.0 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.4 -0.0 -0.1 +0.3 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.7 -0.0 -0.0 -0.4 -1.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.5 +0.0 -0.1 -0.2 -0.9
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 -0.0 -0.1 -1.1 +0.6
complex community Community=Kojac gum; Passage=4 -0.0 +0.2 +0.3 +1.3 -1.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.3 +0.1 -0.3 +0.7 -0.0
complex community Community=Locust bean gum; Passage=1 -0.2 +0.1 +0.1 +0.6 +0.4
complex community Community=guar; Passage=4 -0.7 -0.0 -0.2 +1.6 +0.4
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.3 +0.1 -0.0 +1.3 -0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.4 +0.1 +0.1 +0.6 +0.3
complex community Community=Locust bean gum; Passage=4 +0.8 +0.3 +0.1 +0.1 +0.7
complex community Community=guar; Passage=4 +0.5 -0.2 +0.3 +1.8 -0.4
complex community Community=arabino-guar; Passage=4 -1.2 +0.3 +0.1 +1.9 +1.1
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