Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF32 and GFF33 overlap by 4 nucleotidesGFF33 and GFF34 are separated by 87 nucleotidesGFF34 and GFF35 overlap by 4 nucleotidesGFF35 and GFF36 are separated by 21 nucleotides GFF32 - DNA polymerase III delta prime subunit (EC 2.7.7.7), at 36,132 to 37,145 GFF32 GFF33 - Type IV pilus biogenesis protein PilZ, at 37,142 to 37,528 GFF33 GFF34 - Uncharacterized metal-dependent hydrolase YcfH, at 37,616 to 38,422 GFF34 GFF35 - FOG: Ankyrin repeat, at 38,419 to 39,099 GFF35 GFF36 - Similar to Agmatine deiminase, at 39,121 to 40,245 GFF36
Group Condition GFF32 GFF33 GFF34 GFF35 GFF36
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -1.0 -0.1 -0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -1.1 -0.1 -0.0 +0.1
complex community Community=arabino-guar; Passage=4 N.D. -0.6 -0.4 +0.0 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. -0.8 -0.2 +0.0 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -1.0 -0.0 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -1.0 +0.0 +0.0 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -1.0 -0.0 +0.0 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -1.0 +0.0 +0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.7 -0.1 -0.0 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. -0.8 -0.1 -0.0 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. -0.7 -0.1 -0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.7 -0.1 +0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. -0.7 +0.0 -0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. -0.4 -0.3 +0.0 +0.1
complex community Community=arabino-guar; Passage=4 N.D. -0.9 -0.4 +0.2 +0.7
complex community Community=guar; Passage=4 N.D. +0.6 -0.6 +0.0 +0.0
complex community Community=guar; Passage=4 N.D. +0.7 -0.6 +0.3 +0.2
phage phage_bap4 N.D. +0.7 -0.0 +0.1 -0.1
complex community Community=Locust bean gum; Passage=4 N.D. +0.8 +0.1 -0.2 +0.0
complex community Community=guar; Passage=4 N.D. +0.8 -0.2 +0.1 +0.1
complex community Community=Locust bean gum; Passage=4 N.D. +0.6 -0.0 +0.1 +0.3
complex community Community=guar; Passage=4 N.D. +0.7 -0.3 +0.1 +0.5
complex community Community=Locust bean gum; Passage=4 N.D. +0.9 +0.0 +0.1 +0.1
phage phage_bap4 N.D. +1.3 +0.0 -0.0 -0.1
phage phage_bap4 N.D. +1.1 +0.0 +0.1 -0.1
phage phage_bap4 N.D. +1.3 +0.0 -0.0 +0.1
phage phage_bap4 N.D. +3.9 -0.0 -0.0 +0.1
phage phage_bap4 N.D. +4.1 +0.1 +0.1 -0.1
phage phage_bap4 N.D. +3.9 +0.0 +0.2 +0.1
phage phage_bap4 N.D. +4.0 +0.2 +0.1 +0.2
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