Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3391 and GFF3392 are separated by 106 nucleotidesGFF3392 and GFF3393 are separated by 31 nucleotidesGFF3393 and GFF3394 overlap by 1 nucleotidesGFF3394 and GFF3395 are separated by 127 nucleotides GFF3391 - Chlorogenate esterase, at 213,203 to 215,116 GFF3391 GFF3392 - Transcriptional regulator, AraC family, at 215,223 to 216,101 GFF3392 GFF3393 - Benzoate ABC transporter, ATP-binding protein 2, at 216,133 to 216,834 GFF3393 GFF3394 - Benzoate ABC transporter, ATP-binding protein 1, at 216,834 to 217,583 GFF3394 GFF3395 - Benzoate ABC transporter, permease protein 2, at 217,711 to 218,661 GFF3395
Group Condition GFF3391 GFF3392 GFF3393 GFF3394 GFF3395
complex community Community=Locust bean gum; Passage=4 -0.2 -0.4 -0.2 -3.7 +0.0
complex community Community=arabino-guar; Passage=4 +0.5 -0.4 +0.4 -3.8 -0.3
complex community Community=Locust bean gum; Passage=4 -0.1 +0.0 +0.2 -3.7 -0.1
complex community Community=Locust bean gum; Passage=4 -0.4 +0.3 +0.9 -3.8 +0.2
complex community Community=Locust bean gum; Passage=4 -0.0 +0.3 -0.1 -2.1 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 -0.2 -0.2 -1.2 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 +0.1 +0.1 -1.4 +0.1
complex community Community=arabino-guar; Passage=4 -0.2 +0.4 -1.0 -0.1 -0.1
phage phage_bap4 -0.1 -0.1 -0.1 -0.7 +0.0
phage phage_bap4 +0.0 -0.0 +0.3 -1.3 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 +0.0 -0.2 -0.5 -0.2
phage phage_bap4 -0.0 +0.1 +0.3 -1.4 +0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.0 +0.0 -0.2 -1.2 +0.3
complex community Community=guar; Passage=4 +0.1 +0.0 -0.2 -0.7 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 -0.2 -0.0 -0.8 -0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.0 +0.0 +0.1 -0.8 -0.1
complex community Community=arabino-guar; Passage=4 -0.4 +0.0 +0.8 -1.1 -0.0
phage phage_bap4 +0.1 -0.1 +0.4 -1.1 +0.1
complex community Community=arabino-guar; Passage=4 -0.4 +0.1 -0.2 -0.2 +0.2
complex community Community=Kojac gum; Passage=4 +0.2 +0.1 +0.5 -0.2 -0.8
no phage control no phage control +0.1 +0.0 +0.5 -0.7 +0.0
complex community Community=guar; Passage=4 -0.2 +0.2 +0.8 -0.5 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 +0.1 +0.5 -0.7 +0.2
complex community Community=guar; Passage=4 +0.0 -0.4 +0.6 -0.3 +0.4
vitamin M9 with Supernatant from Cyptococcus -0.1 -0.0 -0.2 +0.7 -0.1
complex community Community=Kojac gum; Passage=1 +0.1 -0.1 +0.1 +0.6 -0.1
phage phage_bap4 +0.2 -0.0 +0.5 -0.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.0 -0.0 +0.4 +0.7 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 +0.2 +0.0 +0.7 +0.1
complex community Community=guar; Passage=4 -0.3 -0.0 +0.3 +1.7 -0.3
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