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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Hydrogenophaga sp. GW460-11-11-14-LB1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF3390 and GFF3391 are separated by 11 nucleotides
GFF3391 and GFF3392 are separated by 475 nucleotides
GFF3392 and GFF3393 are separated by 61 nucleotides
GFF3393 and GFF3394 are separated by 4 nucleotides
GFF3390 - Glucans biosynthesis protein C (EC 2.1.-.-), at 274,542 to 275,717
GFF3390
GFF3391 - hypothetical protein, at 275,729 to 276,061
GFF3391
GFF3392 - hypothetical protein, at 276,537 to 277,115
GFF3392
GFF3393 - Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3), at 277,177 to 278,652
GFF3393
GFF3394 - Dioxygenases related to 2-nitropropane dioxygenase, at 278,657 to 279,640
GFF3394
Group
Condition
GFF3390
GFF3391
GFF3392
GFF3393
GFF3394
carbon source
Ying_sugar7 rep A; time point 1
-0.1
-0.2
-0.7
-0.1
-0.2
carbon source
Ying_AminoAcid20 rep C; time point 1
-0.0
-0.1
-0.5
-0.2
-0.4
carbon source
Ying_Others16 rep A; time point 2
+0.2
-0.0
-0.5
-0.6
-0.3
carbon source
Ying_all64 rep B; time point 1
-0.4
-0.1
-0.3
-0.1
-0.4
carbon source
Ying_Nucleobase14 rep C; time point 2
-0.2
+0.1
-0.4
-0.0
-0.6
carbon source
Ying_Others16 rep C; time point 2
+0.1
-0.1
-0.8
-0.1
-0.3
carbon source
Ying_Nucleobase14 rep C; time point 1
-0.3
-0.4
-0.2
-0.2
+0.1
carbon source
Ying_sugar7 rep A; time point 2
-0.3
+0.2
-0.5
-0.1
-0.1
carbon source
Ying_Nucleobase14 rep A; time point 1
-0.5
+0.4
-0.1
+0.1
-0.4
carbon source
Ying_OrganicAcid7 rep C; time point 2
-0.2
-0.0
-0.4
-0.1
+0.2
carbon source
Ying_sugar7 rep C; time point 3
-0.2
+0.3
-0.6
-0.0
-0.1
carbon source
Ying_all64 rep A; time point 2
-0.0
+0.2
-0.1
-0.0
-0.6
carbon source
Ying_all64 rep B; time point 2
-0.0
+0.4
-0.5
+0.0
-0.3
carbon source
Ying_Others16 rep B; time point 1
-0.1
-0.2
-0.4
+0.1
+0.2
carbon source
Ying_Nucleobase14 rep B; time point 1
-0.4
+0.5
+0.0
-0.3
-0.2
carbon source
Ying_Nucleobase14 rep B; time point 2
+0.1
+0.2
-0.4
+0.0
-0.3
carbon source
Ying_sugar7 rep C; time point 1
+0.1
+0.5
-0.1
-0.1
-0.3
carbon source
Ying_Others16 rep B; time point 3
+0.1
+0.5
-0.5
+0.2
-0.3
carbon source
Ying_all64 rep C; time point 2
+0.1
-0.2
-0.6
+0.2
+0.7
carbon source
Ying_sugar7 rep B; time point 3
-0.1
+0.5
+0.1
-0.3
+0.1
carbon source
Ying_all64 rep C; time point 1
+0.4
+0.4
-0.1
-0.0
-0.2
carbon source
Ying_AminoAcid20 rep A; time point 2
+0.1
+0.2
-0.3
-0.1
+0.5
carbon source
Ying_all64 rep B; time point 3
+0.1
+0.2
+0.2
-0.3
+0.2
carbon source
Ying_sugar7 rep C; time point 2
+0.1
+0.3
+0.4
-0.3
+0.2
carbon source
Ying_OrganicAcid7 rep C; time point 1
+0.2
+0.3
-0.2
-0.0
+0.5
carbon source
Ying_Others16 rep A; time point 3
+0.0
+0.2
+0.3
-0.2
+0.5
carbon source
Ying_AminoAcid20 rep C; time point 3
+0.1
+0.6
+0.1
+0.2
-0.1
carbon source
Ying_AminoAcid20 rep B; time point 3
+0.0
+0.4
-0.1
+0.1
+0.6
carbon source
Ying_OrganicAcid7 rep A; time point 3
+0.1
-0.1
+0.4
+0.3
+0.4
carbon source
Ying_all64 rep C; time point 3
+0.3
+0.3
-0.0
+0.3
+0.8
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