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Cofit
Protein
Homologs
Fitness for 5 genes in
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF3371 and GFF3372 overlap by 2 nucleotides
GFF3372 and GFF3373 are separated by 79 nucleotides
GFF3373 and GFF3374 are separated by 15 nucleotides
GFF3374 and GFF3375 are separated by 12 nucleotides
GFF3371 - hypothetical protein, at 137,832 to 138,236
GFF3371
GFF3372 - Phosphate:acyl-ACP acyltransferase PlsX, at 138,235 to 139,284
GFF3372
GFF3373 - 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41), at 139,364 to 140,317
GFF3373
GFF3374 - Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39), at 140,333 to 141,262
GFF3374
GFF3375 - 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100), at 141,275 to 142,009
GFF3375
Group
Condition
GFF3371
GFF3372
GFF3373
GFF3374
GFF3375
phage
6H2_phage 10 MOI; agar plate assay
N.D.
-0.9
N.D.
N.D.
N.D.
phage
phi19h1_phage 15 MOI
N.D.
-0.9
N.D.
N.D.
N.D.
micoeukaryotes
Acanthamoeba sp., muxed culture-1
N.D.
-0.9
N.D.
N.D.
N.D.
phage
LB_plus_SM_buffer with phi19h1_phage 0.01875 MOI
N.D.
-0.8
N.D.
N.D.
N.D.
phage
6F2_phage 15 MOI
N.D.
-0.7
N.D.
N.D.
N.D.
micoeukaryotes
C.elegans, mixed culture-2
N.D.
-0.7
N.D.
N.D.
N.D.
micoeukaryotes
Dictyostellum sp.mixed culture-1
N.D.
-0.7
N.D.
N.D.
N.D.
phage
phi19h1_phage 15 MOI
N.D.
-0.7
N.D.
N.D.
N.D.
phage
LB_plus_SM_buffer with 6F2_phage 1.875 MOI
N.D.
-0.6
N.D.
N.D.
N.D.
phage
Ffm_phage 10 MOI; agar plate assay
N.D.
-0.6
N.D.
N.D.
N.D.
micoeukaryotes
Dictyostellum sp.mixed culture-2
N.D.
-0.5
N.D.
N.D.
N.D.
phage
LB_plus_SM_buffer with 6D2_phage 15 MOI
N.D.
-0.5
N.D.
N.D.
N.D.
phage
Br60_phage 15 MOI
N.D.
+0.5
N.D.
N.D.
N.D.
nophagecontrol
No phage control
N.D.
+0.5
N.D.
N.D.
N.D.
phage
LB_plus_SM_buffer with EIP16_phage 0.875 MOI
N.D.
+0.5
N.D.
N.D.
N.D.
nophagecontrol
No phage control
N.D.
+0.7
N.D.
N.D.
N.D.
phage
LB_plus_SM_buffer with P22_phage 15 MOI
N.D.
+0.7
N.D.
N.D.
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI
N.D.
+0.7
N.D.
N.D.
N.D.
phage
LB_plus_SM_buffer with S16_phage 15 MOI
N.D.
+0.7
N.D.
N.D.
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
N.D.
+0.7
N.D.
N.D.
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI
N.D.
+0.8
N.D.
N.D.
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI
N.D.
+0.8
N.D.
N.D.
N.D.
phage
Br60_phage 15 MOI
N.D.
+0.9
N.D.
N.D.
N.D.
phage
LB_plus_SM_buffer with EIP16_phage 8.75 MOI
N.D.
+1.0
N.D.
N.D.
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.075 MOI
N.D.
+1.0
N.D.
N.D.
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
N.D.
+1.3
N.D.
N.D.
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage 0.05 MOI
N.D.
+1.4
N.D.
N.D.
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI
N.D.
+1.5
N.D.
N.D.
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage 0.5 MOI
N.D.
+2.2
N.D.
N.D.
N.D.
phage
LB_plus_SM_buffer with Br60_phage 0.0005 MOI
N.D.
+3.3
N.D.
N.D.
N.D.
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