Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF3365 and GFF3366 are separated by 3 nucleotidesGFF3366 and GFF3367 are separated by 70 nucleotidesGFF3367 and GFF3368 are separated by 139 nucleotidesGFF3368 and GFF3369 are separated by 139 nucleotides GFF3365 - Cell division topological specificity factor MinE, at 185,702 to 185,980 GFF3365 GFF3366 - Septum site-determining protein MinD, at 185,984 to 186,799 GFF3366 GFF3367 - Septum site-determining protein MinC, at 186,870 to 187,643 GFF3367 GFF3368 - Pyrimidine permease, at 187,783 to 189,066 GFF3368 GFF3369 - 1,4-dihydroxy-2-naphthoyl-CoA hydrolase (EC 3.1.2.28) in menaquinone biosynthesis, at 189,206 to 189,628 GFF3369
Group Condition GFF3365 GFF3366 GFF3367 GFF3368 GFF3369
complex community Community=Locust bean gum; Passage=4 N.D. -1.4 +0.3 +0.3 -3.2
complex community Community=guar; Passage=4 N.D. -0.1 -0.1 +0.1 -3.4
complex community Community=Locust bean gum; Passage=4 N.D. +0.1 -0.7 +0.4 -3.2
complex community Community=Locust bean gum; Passage=4 N.D. +0.2 -0.1 +0.1 -3.4
complex community Community=guar; Passage=4 N.D. -0.0 +0.1 +0.1 -3.3
complex community Community=Locust bean gum; Passage=4 N.D. +0.1 -0.8 +0.2 -1.9
complex community Community=Kojac gum; Passage=4 N.D. -0.1 -0.2 +0.2 -2.1
no phage control no phage control N.D. -0.5 -0.2 +0.0 -1.2
complex community Community=guar; Passage=4 N.D. -0.9 -0.5 -0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.2 +0.1 -0.2 -1.3
phage phage_bap4 N.D. -0.5 -0.5 +0.1 -0.4
phage phage_bap4 N.D. -0.5 -0.4 +0.0 -0.4
phage phage_bap4 N.D. -0.7 -0.6 +0.0 -0.0
no phage control no phage control N.D. -0.3 -0.4 -0.0 -0.4
complex community Community=arabino-guar; Passage=4 N.D. -0.5 -1.0 -0.1 +0.6
phage phage_bap4 N.D. -0.4 +0.0 +0.1 -0.8
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.1 +0.1 +0.1 -1.2
phage phage_bap4 N.D. -0.6 -0.3 +0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus N.D. -0.2 +0.1 +0.1 -0.7
no phage control no phage control N.D. -0.5 -0.6 +0.0 +0.2
complex community Community=Locust bean gum; Passage=1 N.D. +0.1 -0.2 +0.2 -0.8
complex community Community=guar; Passage=4 N.D. -0.2 +0.3 -0.1 -0.6
phage phage_bap4 N.D. -0.3 +0.1 +0.1 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.1 +0.2 +0.0 -1.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -0.2 +0.2 +0.1 -0.7
complex community Community=arabino-guar; Passage=4 N.D. -0.6 -0.3 -0.1 +0.5
phage phage_bap4 N.D. -0.4 -0.3 +0.1 +0.4
phage phage_bap4 N.D. -0.4 -0.4 +0.1 +0.6
complex community Community=arabino-guar; Passage=4 N.D. -0.2 -0.8 +0.2 +0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.2 +0.4 +0.1 -0.6
remove
GFF3365
plot		 remove
GFF3366
plot		 remove
GFF3367		 remove
GFF3368
plot		 remove
GFF3369
plot