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Cofit
Protein
Homologs
Fitness for 5 genes in
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF3362 and GFF3363 are separated by 64 nucleotides
GFF3363 and GFF3364 are separated by 14 nucleotides
GFF3364 and GFF3365 are separated by 256 nucleotides
GFF3365 and GFF3366 are separated by 573 nucleotides
GFF3362 - Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-), at 126,505 to 127,455
GFF3362
GFF3363 - Flagellar hook-associated protein FlgK, at 127,520 to 129,181
GFF3363
GFF3364 - Flagellar hook-associated protein FlgL, at 129,196 to 130,149
GFF3364
GFF3365 - Ribonuclease E (EC 3.1.26.12), at 130,406 to 133,609
GFF3365
GFF3366 - Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70), at 134,183 to 135,142
GFF3366
Group
Condition
GFF3362
GFF3363
GFF3364
GFF3365
GFF3366
phage
LB_plus_SM_buffer with 6D2_phage 0.75 MOI
-1.1
-0.2
-0.8
N.D.
-0.5
phage
LB_plus_SM_buffer with 6H2_phage 0.5 MOI
-0.9
-0.1
-0.9
N.D.
-0.2
phage
LB_plus_SM_buffer with 8C2_phage 15 MOI
-1.2
+0.1
-0.8
N.D.
-0.1
phage
LB_plus_SM_buffer with 6C2_phage 15 MOI
-0.8
-0.0
-1.2
N.D.
+0.1
phage
LB_plus_SM_buffer with ES18h1_phage 0.75 MOI
-0.0
+0.0
-0.8
N.D.
-1.1
phage
phi19h1_phage 15 MOI
-1.3
-0.2
-0.6
N.D.
+0.2
phage
phi19h1_phage 15 MOI
-0.4
-0.2
-0.9
N.D.
-0.2
phage
phi19h1_phage 15 MOI
-0.5
-0.2
-0.8
N.D.
-0.2
phage
LB_plus_SM_buffer with 6F2_phage 1.875 MOI
-1.0
-0.1
-0.3
N.D.
-0.4
phage
LB_plus_SM_buffer with 6D2_phage 15 MOI
-0.8
+0.0
-0.8
N.D.
+0.0
phage
LB_plus_SM_buffer with 8C2_phage 15 MOI
-0.8
+0.0
-1.0
N.D.
+0.2
phage
LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI
-0.5
+0.2
-1.0
N.D.
-0.1
phage
LB_plus_SM_buffer with P22_phage 15 MOI
+0.3
+0.6
-0.3
N.D.
-0.6
phage
LB_plus_SM_buffer with phi19h1_phage 0.001875 MOI
+0.8
+0.1
+0.4
N.D.
-0.7
phage
LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI
+0.3
+0.3
+0.8
N.D.
-0.5
phage
LB_plus_SM_buffer with 6F2_phage 0.1875 MOI
+0.3
+0.6
+0.7
N.D.
-0.4
phage
LB_plus_SM_buffer with EIP30_phage 0.0000875 MOI
+0.9
+0.4
+0.3
N.D.
-0.3
phage
LB_plus_SM_buffer with Br60_phage 0.0000005 MOI
+0.9
+0.6
+0.6
N.D.
-0.7
phage
LB_plus_SM_buffer with EIP16_phage 0.875 MOI
+0.7
+0.2
+0.2
N.D.
+0.6
phage
LB_plus_SM_buffer with Br60_phage 0.0005 MOI
+1.2
+0.6
+1.1
N.D.
-1.1
phage
LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI
+0.7
+0.9
+0.4
N.D.
+0.1
phage
LB_plus_SM_buffer with EIP16_phage 8.75 MOI
+0.9
+0.5
+0.2
N.D.
+1.0
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.0075 MOI
+1.1
+0.8
+0.3
N.D.
+0.4
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
+1.0
+1.3
+0.9
N.D.
+0.5
phage
LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI
+1.1
+1.2
+0.8
N.D.
+0.8
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.075 MOI
+1.4
+1.1
+0.9
N.D.
+0.8
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
+1.3
+1.4
+0.9
N.D.
+0.9
phage
LB_plus_SM_buffer with FelixO1_phage 0.5 MOI
+1.3
+1.2
+0.7
N.D.
+1.4
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI
+1.6
+1.5
+0.5
N.D.
+1.4
phage
LB_plus_SM_buffer with FelixO1_phage 0.05 MOI
+1.6
+1.8
+1.4
N.D.
+0.9
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