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Cofit
Protein
Homologs
Fitness for 5 genes in
Hydrogenophaga sp. GW460-11-11-14-LB1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF3361 and GFF3362 are separated by 15 nucleotides
GFF3362 and GFF3363 are separated by 40 nucleotides
GFF3363 and GFF3364 are separated by 29 nucleotides
GFF3364 and GFF3365 are separated by 157 nucleotides
GFF3361 - 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33), at 246,921 to 247,571
GFF3361
GFF3362 - hypothetical protein, at 247,587 to 247,748
GFF3362
GFF3363 - 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33), at 247,789 to 249,210
GFF3363
GFF3364 - Transcriptional regulator, at 249,240 to 250,166
GFF3364
GFF3365 - Citrate synthase (si) (EC 2.3.3.1), at 250,324 to 251,634
GFF3365
Group
Condition
GFF3361
GFF3362
GFF3363
GFF3364
GFF3365
carbon source
Ying_Others16 rep C; time point 3
-7.1
N.D.
-5.2
-0.2
N.D.
carbon source
Ying_sugar7 rep B; time point 3
-6.9
N.D.
-5.7
+0.1
N.D.
carbon source
Ying_Others16 rep B; time point 3
-6.9
N.D.
-5.3
-0.2
N.D.
carbon source
Ying_OrganicAcid7 rep B; time point 3
-6.6
N.D.
-5.4
-0.3
N.D.
carbon source
Ying_Others16 rep C; time point 2
-6.8
N.D.
-5.3
-0.1
N.D.
carbon source
Ying_sugar7 rep A; time point 3
-7.3
N.D.
-5.0
+0.1
N.D.
carbon source
Ying_OrganicAcid7 rep C; time point 3
-6.6
N.D.
-5.3
-0.1
N.D.
carbon source
Ying_OrganicAcid7 rep A; time point 2
-6.4
N.D.
-5.0
-0.4
N.D.
carbon source
Ying_OrganicAcid7 rep A; time point 3
-6.4
N.D.
-5.3
+0.4
N.D.
carbon source
Ying_all64 rep C; time point 3
-6.1
N.D.
-5.3
+0.2
N.D.
carbon source
Ying_Others16 rep A; time point 3
-6.4
N.D.
-5.0
+0.2
N.D.
carbon source
Ying_Others16 rep A; time point 2
-5.5
N.D.
-5.4
-0.1
N.D.
carbon source
Ying_sugar7 rep C; time point 3
-6.5
N.D.
-4.3
-0.1
N.D.
carbon source
Ying_OrganicAcid7 rep C; time point 2
-5.5
N.D.
-4.6
-0.2
N.D.
carbon source
Ying_OrganicAcid7 rep B; time point 2
-5.7
N.D.
-4.7
+0.2
N.D.
carbon source
Ying_Others16 rep B; time point 2
-5.3
N.D.
-5.1
+0.3
N.D.
carbon source
Ying_sugar7 rep A; time point 2
-4.6
N.D.
-4.2
-0.2
N.D.
carbon source
Ying_all64 rep A; time point 3
-4.4
N.D.
-4.1
-0.3
N.D.
carbon source
Ying_Others16 rep A; time point 1
-4.6
N.D.
-4.2
+0.0
N.D.
carbon source
Ying_Others16 rep B; time point 1
-4.3
N.D.
-3.7
-0.5
N.D.
carbon source
Ying_all64 rep C; time point 2
-3.9
N.D.
-3.8
-0.8
N.D.
carbon source
Ying_all64 rep B; time point 3
-4.4
N.D.
-4.1
+0.1
N.D.
carbon source
Ying_Others16 rep C; time point 1
-4.5
N.D.
-3.5
-0.4
N.D.
carbon source
Ying_sugar7 rep C; time point 2
-5.3
N.D.
-3.5
+0.6
N.D.
carbon source
Ying_sugar7 rep B; time point 2
-4.5
N.D.
-3.8
+0.3
N.D.
carbon source
Ying_Nucleobase14 rep A; time point 2
-4.0
N.D.
-3.5
-0.2
N.D.
carbon source
Ying_OrganicAcid7 rep A; time point 1
-3.9
N.D.
-3.2
-0.2
N.D.
carbon source
Ying_OrganicAcid7 rep C; time point 1
-3.6
N.D.
-3.1
-0.6
N.D.
carbon source
Ying_Nucleobase14 rep B; time point 2
-3.1
N.D.
-3.8
-0.3
N.D.
carbon source
Ying_Nucleobase14 rep C; time point 2
-3.4
N.D.
-2.9
-0.1
N.D.
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