Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_17190	PS417_17195	PS417_17200	PS417_17205	PS417_17210
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.8	+0.0	-1.7	-0.5	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.0	-0.1	-0.6	-1.0	-0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.4	+0.1	-1.0	-0.3	+0.1
supernatant control	Vogels_fungal_media 0.1X	-0.9	-0.2	+0.5	+0.1	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.3	+0.1	+0.4	-0.3	+0.3
phage	P. simiae OR Antrim MOI 10	-0.8	+0.1	+0.4	-0.4	+0.2
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+0.3	+0.1	+0.8	-0.7	-0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.6	+0.2	+0.7	-0.2	+0.2
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+0.6	+0.1	+0.7	-0.7	-0.1
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+0.5	+0.0	+0.8	-0.4	-0.3
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+0.5	+0.2	+1.1	-0.6	-0.2
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.7	+0.1	+1.6	-0.7	-0.7
soil	soil sample 4; outgrowth in LB	+1.6	+0.1	-0.4	-0.4	+0.2
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.5	+0.3	+1.6	-0.8	-0.5
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+0.9	+0.0	+1.0	-0.6	-0.2
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+0.6	+0.1	+1.1	-0.5	-0.1
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+1.0	+0.3	+1.7	-1.0	-0.6
stress	methylglyoxal 0.032 vol%	-0.4	+0.5	+0.5	+0.3	+0.6
soil	soil sample 7; outgrowth in LB	+1.1	-0.1	+0.4	+0.0	+0.3
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.2	+0.3	+0.6	+1.2	-0.1
stress	Cisplatin 0.01 mg/ml	+0.6	+0.1	+0.4	+0.3	+0.5
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.5	+0.1	+0.6	+0.2	+0.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.2	+0.2	+1.0	+0.3	+0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.5	+0.6	+0.5	+0.2	+0.2
soil	soil sample 8; outgrowth in LB	+1.8	+0.0	-0.0	-0.0	+0.2
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.7	+0.1	+1.7	-0.2	-0.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.8	+0.3	+0.6	+0.1	+0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+1.2	-0.0	+0.8	-0.1	+0.4
carbon source	L-Valine (C)	+1.1	+0.2	+0.6	+0.5	+0.4
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+1.5	+0.2	+1.7	+0.1	-0.2