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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF3359 and GFF3360 overlap by 4 nucleotides
GFF3360 and GFF3361 overlap by 4 nucleotides
GFF3361 and GFF3362 are separated by 45 nucleotides
GFF3362 and GFF3363 are separated by 0 nucleotides
GFF3359 - hypothetical protein, at 3,409,253 to 3,410,122
GFF3359
GFF3360 - Aerobic carbon monoxide dehydrogenase (quinone), small chain (EC 1.2.5.3), at 3,410,119 to 3,410,598
GFF3360
GFF3361 - Carbon monoxide dehydrogenase large chain (EC 1.2.99.2), at 3,410,595 to 3,413,231
GFF3361
GFF3362 - hypothetical protein, at 3,413,277 to 3,413,348
GFF3362
GFF3363 - Mobile element protein, at 3,413,349 to 3,413,504
GFF3363
Group
Condition
GFF3359
GFF3360
GFF3361
GFF3362
GFF3363
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.3
-0.3
-0.1
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.3
-0.4
+0.2
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.3
-0.1
-0.0
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
-0.1
+0.0
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.1
-0.0
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
-0.1
-0.0
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.0
-0.1
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.1
-0.1
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.0
+0.1
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
+0.0
+0.0
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.2
-0.1
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
-0.0
-0.1
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.1
+0.0
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
+0.1
-0.0
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
+0.1
+0.0
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
+0.1
+0.0
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.0
+0.0
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
+0.1
+0.1
N.D.
N.D.
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