Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

Or view all 554 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PS417_17185	PS417_17190	PS417_17195	PS417_17200	PS417_17205
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.2	-0.8	+0.0	-1.7	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.3	-1.4	+0.1	-1.0	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.3	-1.0	-0.1	-0.6	-1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.5	-0.8	+0.1	-0.5	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.2	-0.7	-0.3	-0.6	+0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.3	-1.1	+0.1	-0.4	-0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.2	-1.4	+0.2	+0.0	+0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.3	-1.3	+0.1	+0.4	-0.3
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.3	+0.3	+0.1	+0.8	-0.7
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.3	-0.6	+0.2	+0.7	-0.2
soil	soil sample 5; outgrowth in LB	+0.3	+0.0	+0.2	+0.7	-0.7
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.2	+0.5	+0.0	+0.8	-0.4
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+0.1	+0.6	+0.1	+0.7	-0.7
soil	soil sample 4; outgrowth in LB	+0.0	+1.6	+0.1	-0.4	-0.4
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.2	+0.5	+0.2	+1.1	-0.6
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.1	+0.9	+0.0	+1.0	-0.6
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.0	+0.6	+0.1	+1.1	-0.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.1	+0.5	+0.6	+0.5	+0.2
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.0	+0.5	+0.3	+1.6	-0.8
rhizosphere	rhizosphere sample 8; outgrowth in LB	+0.2	+1.4	-0.1	+0.3	-0.1
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.0	-0.2	+0.3	+0.6	+1.2
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.8	-0.1	+0.2	+0.7	+0.1
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.2	+0.7	+0.1	+1.6	-0.7
soil	soil sample 8; outgrowth in LB	+0.0	+1.8	+0.0	-0.0	-0.0
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.2	+0.8	+0.3	+0.6	+0.1
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.2	+1.0	+0.3	+1.7	-1.0
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.1	+0.7	+0.1	+1.7	-0.2
carbon source	L-Valine (C)	-0.0	+1.1	+0.2	+0.6	+0.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.5	+1.2	-0.0	+0.8	-0.1
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.2	+1.5	+0.2	+1.7	+0.1