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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF3342 and GFF3343 are separated by 149 nucleotides
GFF3343 and GFF3344 are separated by 68 nucleotides
GFF3344 and GFF3345 overlap by 4 nucleotides
GFF3345 and GFF3346 overlap by 4 nucleotides
GFF3342 - Putative phosphatase, at 3,392,550 to 3,394,436
GFF3342
GFF3343 - Polar-differentiation response regulator DivK, at 3,394,586 to 3,394,948
GFF3343
GFF3344 - Mlr0862 protein, at 3,395,017 to 3,395,304
GFF3344
GFF3345 - Mlr0864 protein, at 3,395,301 to 3,395,957
GFF3345
GFF3346 - RidA/YER057c/UK114 superfamily, group 1, at 3,395,954 to 3,396,421
GFF3346
Group
Condition
GFF3342
GFF3343
GFF3344
GFF3345
GFF3346
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.3
-0.6
-0.1
-0.6
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.0
-0.3
-0.1
-0.6
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
+0.4
-0.5
+0.1
-1.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.2
-0.4
+0.0
-0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.1
-0.4
+0.0
-0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.2
-0.2
-0.0
-0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
+0.1
-0.1
-0.1
-0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
+0.0
-0.1
-0.3
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.1
-0.1
-0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
+0.2
-0.1
+0.2
-0.8
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.2
+0.1
-0.1
-0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
+0.2
-0.2
+0.0
-0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
+0.2
-0.1
+0.1
-0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
+0.2
-0.1
-0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
+0.4
-0.3
-0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.2
-0.1
+0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
+0.2
-0.0
+0.0
-0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.0
+0.3
-0.1
-0.4
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