Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_16965	PS417_16970	PS417_16975	PS417_16980	PS417_16985
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.8	-0.5	-0.3	+0.1	+0.3
stress	LB_noSalt with Chloride 1100 mM	-0.3	-0.3	-0.6	-0.8	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.5	-0.5	-0.1	-0.4	-0.4
stress	LB_noSalt with Chloride 1100 mM	-0.5	-0.3	-0.4	-0.7	+0.0
carbon source	L-Valine (C)	-1.0	-0.2	-0.8	+0.3	-0.1
root	root sample 6; outgrowth in LB	+0.1	-0.0	-0.3	-1.0	-0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.2	+0.1	-0.3	-1.4	-0.2
stress	methylglyoxal 0.032 vol%	-1.0	-0.7	+0.3	+0.3	-0.4
phage	P. simiae ORA MOI 10	-0.3	-0.7	-0.6	+0.2	+0.1
solid stress	Fraxetin 3 mM; solid stress	+0.3	+0.1	-0.2	-1.3	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.2	-0.3	+0.5	-0.6	-0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.2	+0.1	-1.2	+0.2	+0.4
carbon source	2'-Deoxyinosine 5 mM (C)	+0.2	-0.3	-1.0	+0.4	-0.1
carbon source	L-Valine (C)	-0.6	-0.9	+0.6	-0.2	+0.2
phage	JP1 MOI 10	+0.1	-0.3	-0.5	-0.3	+0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.7	-0.5	+0.1	+0.4	+0.4
seeds	Growth on radish seeds for 72 hours	-0.7	+0.2	+0.2	-0.9	+0.9
solid stress	Fraxetin 3 mM; solid stress	+0.5	-0.1	-0.3	-0.6	+0.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.3	+0.2	+0.3	-0.6	+0.7
carbon source	2-Deoxy-D-ribonic lithium salt 10 mM (C)	-0.1	+0.2	-0.7	+0.6	+0.4
stress	R2A with Fusaric 120 ug/mL	+0.5	+0.8	-0.2	-0.0	-0.4
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	+0.3	+0.0	-0.7	+0.2	+0.9
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.3	+0.1	+0.2	-0.5	+1.0
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.4	+0.3	-0.4	+0.9	+0.6
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-0.0	-0.1	-0.0	+1.9	-0.4
stress	R2A with Fusaric 120 ug/mL	+1.0	+0.6	+0.3	+0.1	-0.1
phage	P. simiae OR1 MOI 0.1	+0.4	+0.1	+0.5	+0.1	+0.9
agar plate interaction control	Taped volatile agar plate with no fungus	+0.5	+0.2	+1.2	+0.4	-0.1
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.2	+0.7	+0.6	-0.2	+1.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.4	+0.2	-0.1	+1.9	+0.3