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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF3314 and GFF3315 overlap by 11 nucleotides
GFF3315 and GFF3316 are separated by 197 nucleotides
GFF3316 and GFF3317 are separated by 145 nucleotides
GFF3317 and GFF3318 are separated by 44 nucleotides
GFF3314 - hypothetical protein, at 3,367,057 to 3,367,761
GFF3314
GFF3315 - hypothetical protein, at 3,367,751 to 3,368,245
GFF3315
GFF3316 - hypothetical protein, at 3,368,443 to 3,369,324
GFF3316
GFF3317 - Peptide chain release factor 3, at 3,369,470 to 3,371,047
GFF3317
GFF3318 - Uncharacterized MFS-type transporter, at 3,371,092 to 3,372,342
GFF3318
Group
Condition
GFF3314
GFF3315
GFF3316
GFF3317
GFF3318
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
-0.4
-0.2
-0.5
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
+0.0
-0.2
-0.8
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
-0.2
-0.1
-0.4
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
-0.4
-0.1
-0.2
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.1
-0.1
-0.5
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
-0.0
+0.1
-0.4
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
-0.2
-0.1
-0.4
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.1
-0.1
-0.4
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
-0.2
+0.0
-0.3
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.2
+0.0
-0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.2
+0.1
-0.2
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
-0.1
+0.0
-0.4
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
-0.4
+0.0
-0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
-0.0
-0.1
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
-0.2
-0.0
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.1
-0.1
-0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
-0.0
+0.0
-0.3
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.0
+0.2
-0.2
+0.0
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