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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF3311 and GFF3312 are separated by 71 nucleotides
GFF3312 and GFF3313 overlap by 4 nucleotides
GFF3313 and GFF3314 are separated by 17 nucleotides
GFF3314 and GFF3315 overlap by 11 nucleotides
GFF3311 - Homoserine/homoserine lactone efflux protein, at 3,362,842 to 3,363,462
GFF3311
GFF3312 - Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20), at 3,363,534 to 3,364,625
GFF3312
GFF3313 - Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20), at 3,364,622 to 3,367,039
GFF3313
GFF3314 - hypothetical protein, at 3,367,057 to 3,367,761
GFF3314
GFF3315 - hypothetical protein, at 3,367,751 to 3,368,245
GFF3315
Group
Condition
GFF3311
GFF3312
GFF3313
GFF3314
GFF3315
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
N.D.
N.D.
-0.2
-0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
N.D.
N.D.
-0.2
-0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
N.D.
N.D.
+0.0
-0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
N.D.
N.D.
-0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.3
N.D.
N.D.
-0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
N.D.
N.D.
-0.2
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
N.D.
N.D.
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
N.D.
N.D.
-0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
N.D.
N.D.
-0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
N.D.
N.D.
-0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
N.D.
N.D.
-0.2
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
N.D.
N.D.
+0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
N.D.
N.D.
+0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
N.D.
N.D.
+0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
N.D.
N.D.
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
N.D.
N.D.
-0.0
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
N.D.
N.D.
+0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
N.D.
N.D.
+0.1
+0.0
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