Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3310 and GFF3311 are separated by 85 nucleotidesGFF3311 and GFF3312 are separated by 4 nucleotidesGFF3312 and GFF3313 overlap by 4 nucleotidesGFF3313 and GFF3314 are separated by 577 nucleotides GFF3310 - Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-), at 135,600 to 138,002 GFF3310 GFF3311 - FIG00349859: hypothetical protein, at 138,088 to 138,693 GFF3311 GFF3312 - Sensory histidine kinase CreC of two-component signal transduction system CreBC, at 138,698 to 140,149 GFF3312 GFF3313 - Response regulator CreB of two-component signal transduction system CreBC, at 140,146 to 140,940 GFF3313 GFF3314 - FIG00349255: hypothetical protein, at 141,518 to 142,477 GFF3314
Group Condition GFF3310 GFF3311 GFF3312 GFF3313 GFF3314
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 -0.2 -0.1 -0.3 -0.2
phage phage_bap4 -0.2 +0.0 -0.1 -0.2 -0.2
phage phage_bap4 -0.1 -0.2 -0.1 -0.2 -0.0
phage phage_bap4 -0.0 -0.2 -0.1 -0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.0 -0.2 -0.2 -0.0 -0.1
phage phage_bap4 -0.1 -0.1 -0.0 -0.1 -0.2
no phage control no phage control -0.0 -0.1 -0.1 -0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 -0.2 -0.0 -0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 -0.3 -0.1 -0.1 +0.0
complex community Community=guar; Passage=4 +0.0 -0.2 -0.0 -0.5 +0.3
phage phage_bap4 -0.0 +0.1 -0.1 -0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 -0.2 +0.0 -0.1 +0.0
phage phage_bap4 +0.1 -0.2 -0.0 -0.0 +0.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.1 +0.2 -0.0 -0.1 -0.1
complex community Community=arabino-guar; Passage=4 +0.2 +0.2 -0.1 -0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 -0.2 +0.0 +0.1 -0.0
no phage control no phage control -0.0 +0.2 +0.0 +0.0 -0.1
complex community Community=Kojac gum; Passage=4 -0.1 +0.4 -0.1 +0.1 -0.2
complex community Community=guar; Passage=4 -0.1 -0.3 -0.0 +0.3 +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 -0.0 +0.2 -0.0 -0.1
vitamin M9 with Supernatant from Cyptococcus +0.0 -0.1 +0.2 +0.1 -0.0
complex community Community=guar; Passage=4 +0.1 -0.1 -0.0 +0.3 +0.0
complex community Community=arabino-guar; Passage=4 -0.0 -0.2 +0.2 +0.2 +0.2
complex community Community=arabino-guar; Passage=4 -0.0 +0.5 +0.0 +0.0 -0.2
complex community Community=Locust bean gum; Passage=4 +0.1 +0.4 -0.0 -0.1 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 +0.2 +0.1 -0.0 +0.0
phage phage_bap4 -0.0 +0.2 +0.2 +0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus -0.0 +0.2 +0.0 +0.2 +0.1
complex community Community=Locust bean gum; Passage=4 +0.1 -0.1 +0.1 +0.5 -0.1
complex community Community=Locust bean gum; Passage=4 -0.0 +0.4 +0.3 +0.5 +0.2
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