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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF3308 and GFF3309 are separated by 159 nucleotides
GFF3309 and GFF3310 are separated by 13 nucleotides
GFF3310 and GFF3311 are separated by 178 nucleotides
GFF3311 and GFF3312 are separated by 71 nucleotides
GFF3308 - Exported protein, at 3,359,762 to 3,361,924
GFF3308
GFF3309 - LSU ribosomal protein L35p, at 3,362,084 to 3,362,287
GFF3309
GFF3310 - LSU ribosomal protein L20p, at 3,362,301 to 3,362,663
GFF3310
GFF3311 - Homoserine/homoserine lactone efflux protein, at 3,362,842 to 3,363,462
GFF3311
GFF3312 - Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20), at 3,363,534 to 3,364,625
GFF3312
Group
Condition
GFF3308
GFF3309
GFF3310
GFF3311
GFF3312
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
N.D.
N.D.
-0.3
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
N.D.
N.D.
-0.2
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
N.D.
N.D.
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
N.D.
N.D.
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
N.D.
N.D.
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
N.D.
N.D.
+0.0
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
N.D.
N.D.
-0.2
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
N.D.
N.D.
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
N.D.
N.D.
+0.0
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
N.D.
N.D.
+0.0
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
N.D.
N.D.
+0.0
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
N.D.
N.D.
+0.0
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
N.D.
N.D.
+0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
N.D.
N.D.
+0.0
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
N.D.
N.D.
+0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
N.D.
N.D.
+0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
N.D.
N.D.
-0.0
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
N.D.
N.D.
+0.1
N.D.
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