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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF3306 and GFF3307 are separated by 4 nucleotides
GFF3307 and GFF3308 are separated by 69 nucleotides
GFF3308 and GFF3309 are separated by 159 nucleotides
GFF3309 and GFF3310 are separated by 13 nucleotides
GFF3306 - O-acetyl-ADP-ribose deacetylase, at 3,358,738 to 3,359,274
GFF3306
GFF3307 - hypothetical protein, at 3,359,279 to 3,359,692
GFF3307
GFF3308 - Exported protein, at 3,359,762 to 3,361,924
GFF3308
GFF3309 - LSU ribosomal protein L35p, at 3,362,084 to 3,362,287
GFF3309
GFF3310 - LSU ribosomal protein L20p, at 3,362,301 to 3,362,663
GFF3310
Group
Condition
GFF3306
GFF3307
GFF3308
GFF3309
GFF3310
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.5
-0.0
-0.1
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
-0.3
-0.1
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.3
-0.2
-0.1
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
-0.3
-0.1
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.3
-0.3
+0.0
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.4
+0.1
-0.1
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.2
-0.1
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
-0.1
-0.1
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
+0.0
-0.1
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
-0.0
-0.0
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.2
+0.0
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
+0.0
-0.1
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.1
-0.1
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.1
-0.0
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
+0.1
-0.1
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.1
-0.0
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.1
+0.1
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.4
-0.1
-0.0
N.D.
N.D.
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