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Cofit
Protein
Homologs
Fitness for 5 genes in
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF3302 and GFF3303 are separated by 229 nucleotides
GFF3303 and GFF3304 are separated by 892 nucleotides
GFF3304 and GFF3305 are separated by 105 nucleotides
GFF3305 and GFF3306 are separated by 284 nucleotides
GFF3302 - FIG00639374: hypothetical protein, at 73,486 to 73,617
GFF3302
GFF3303 - Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter, at 73,847 to 75,355
GFF3303
GFF3304 - Phosphate starvation-inducible protein PhoH, predicted ATPase, at 76,248 to 77,036
GFF3304
GFF3305 - Sialic acid utilization regulator, RpiR family, at 77,142 to 78,023
GFF3305
GFF3306 - Predicted sialic acid transporter, at 78,308 to 79,804
GFF3306
Group
Condition
GFF3302
GFF3303
GFF3304
GFF3305
GFF3306
phage
LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI
N.D.
-0.2
-0.5
-0.1
-0.2
phage
LB_plus_SM_buffer with 6D2_phage 15 MOI
N.D.
-0.0
-0.0
-0.5
-0.3
phage
6F2_phage 15 MOI
N.D.
-0.0
-0.4
-0.6
+0.2
phage
LB_plus_SM_buffer with 6F2_phage 15 MOI
N.D.
+0.0
-0.1
-0.5
-0.3
phage
LB_plus_SM_buffer with 6C2_phage 0.25 MOI
N.D.
-0.0
-0.5
-0.3
+0.1
phage
LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI
N.D.
-0.3
-0.5
+0.3
-0.1
phage
LB_plus_SM_buffer with Ffm_phage 0.0001875 MOI
N.D.
-0.3
-0.5
-0.0
+0.3
phage
LB_plus_SM_buffer with 6H2_phage 0.5 MOI
N.D.
+0.1
-0.4
-0.0
-0.2
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
N.D.
+0.1
-0.6
+0.1
+0.0
phage
LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI
N.D.
-0.5
+0.3
-0.1
+0.0
phage
LB_plus_SM_buffer with 6C2_phage 15 MOI
N.D.
+0.3
-0.2
-0.1
-0.3
phage
6F2_phage 15 MOI
N.D.
-0.1
-0.2
+0.4
-0.3
phage
LB_plus_SM_buffer with Ffm_phage 0.1875 MOI
N.D.
+0.1
-0.5
+0.1
+0.1
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
N.D.
+0.2
-0.1
+0.2
-0.3
phage
LB_plus_SM_buffer with 6C2_phage 15 MOI
N.D.
+0.2
-0.3
+0.2
-0.1
micoeukaryotes
Dictyostellum sp.mixed culture-2
N.D.
-0.2
-0.3
+0.2
+0.3
phage
LB_plus_SM_buffer with Br60_phage 0.0000005 MOI
N.D.
-0.1
-0.1
+0.6
+0.0
phage
LB_plus_SM_buffer with 6F2_phage 0.01875 MOI
N.D.
+0.0
-0.2
+0.2
+0.3
phage
LB_plus_SM_buffer with 6F2_phage 0.001875 MOI
N.D.
-0.0
-0.2
+0.5
+0.0
phage
LB_plus_SM_buffer with 6F2_phage 0.1875 MOI
N.D.
+0.2
+0.4
-0.2
-0.0
phage
6H2_phage 10 MOI; agar plate assay
N.D.
+0.1
-0.3
+0.7
-0.1
phage
LB_plus_SM_buffer with S16_phage 15 MOI
N.D.
-0.2
+0.2
+0.5
+0.0
phage
LB_plus_SM_buffer with 8C2_phage 15 MOI
N.D.
+0.2
-0.4
+0.6
+0.2
phage
LB_plus_SM_buffer with EIP16_phage 0.0875 MOI
N.D.
+0.3
+0.0
+0.4
+0.2
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.075 MOI
N.D.
+0.0
-0.1
+0.8
+0.2
phage
LB_plus_SM_buffer with 6F2_phage 1.875 MOI
N.D.
+0.2
+0.1
+0.4
+0.4
phage
LB_plus_SM_buffer with FelixO1_phage 0.05 MOI
N.D.
+0.2
+0.0
+0.5
+0.3
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI
N.D.
+0.3
-0.3
+0.7
+0.3
phage
LB_plus_SM_buffer with P22_phage 15 MOI
N.D.
+0.2
+0.7
+0.5
+0.3
phage
LB_plus_SM_buffer with Br60_phage 0.0005 MOI
N.D.
-0.3
+0.8
+2.1
+0.1
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