Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3300 and GFF3301 overlap by 4 nucleotidesGFF3301 and GFF3302 are separated by 129 nucleotidesGFF3302 and GFF3303 overlap by 4 nucleotidesGFF3303 and GFF3304 overlap by 4 nucleotides GFF3300 - hypothetical protein, at 124,265 to 124,822 GFF3300 GFF3301 - Lignostilbene-alpha,beta-dioxygenase and related enzymes, at 124,819 to 126,246 GFF3301 GFF3302 - no description, at 126,376 to 127,017 GFF3302 GFF3303 - Acetyltransferase, GNAT family, at 127,014 to 127,778 GFF3303 GFF3304 - Monofunctional biosynthetic peptidoglycan transglycosylase, at 127,775 to 129,043 GFF3304
Group Condition GFF3300 GFF3301 GFF3302 GFF3303 GFF3304
complex community Community=arabino-guar; Passage=4 -0.3 -0.2 -0.7 -0.9 -0.6
complex community Community=Locust bean gum; Passage=4 +0.2 -0.1 -1.2 -0.9 -0.1
complex community Community=arabino-guar; Passage=4 -0.5 +0.1 -0.9 -0.4 -0.2
complex community Community=guar; Passage=4 -0.0 -0.4 -0.5 -0.7 +0.1
complex community Community=Kojac gum; Passage=4 +0.2 -0.3 -0.7 -0.5 +0.0
complex community Community=Locust bean gum; Passage=4 +0.6 -0.0 -0.9 -0.1 -0.8
complex community Community=guar; Passage=4 +0.1 +0.2 -0.8 -0.5 +0.1
no phage control no phage control -0.2 -0.0 -0.1 -0.6 -0.0
no phage control no phage control +0.0 -0.1 -0.2 -0.4 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 -0.1 -0.3 -0.3 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 +0.1 -0.3 -0.4 -0.1
phage phage_bap4 -0.2 -0.0 -0.3 -0.1 -0.1
complex community Community=Locust bean gum; Passage=4 -0.0 -0.1 -0.3 -0.3 -0.1
phage phage_bap4 -0.1 +0.0 -0.0 -0.5 -0.2
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.0 -0.3 -0.3 -0.1
no phage control no phage control -0.0 -0.1 -0.1 -0.5 -0.0
complex community Community=arabino-guar; Passage=4 +0.7 -0.2 -0.9 -0.6 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.3 +0.0 -0.2 -0.1 -0.1
complex community Community=arabino-guar; Passage=4 +0.5 -0.0 -0.7 -0.4 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.1 -0.5 -0.1 +0.2
complex community Community=guar; Passage=4 -0.1 -0.1 -0.5 +0.2 -0.2
vitamin M9 with Supernatant from Cyptococcus +0.1 +0.1 -0.2 -0.5 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 +0.1 +0.2 -0.5 -0.0
complex community Community=Locust bean gum; Passage=4 +1.0 -0.0 -1.2 -0.0 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.1 -0.2 +0.3 -0.1
phage phage_bap4 +0.3 +0.1 +0.1 -0.3 -0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.0 +0.0 -0.3 +0.4 -0.1
vitamin M9 with Supernatant from Cyptococcus +0.0 -0.0 -0.3 +0.3 +0.1
complex community Community=guar; Passage=4 +0.5 +0.2 -0.4 +0.5 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.3 +0.0 +0.1 +0.1 +0.3
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