Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3293 and GFF3294 are separated by 19 nucleotidesGFF3294 and GFF3295 are separated by 11 nucleotidesGFF3295 and GFF3296 are separated by 223 nucleotidesGFF3296 and GFF3297 are separated by 84 nucleotides GFF3293 - Inner membrane protein YbhQ, at 117,689 to 118,639 GFF3293 GFF3294 - Cardiolipin synthase (EC 2.7.8.-) bacterial type ClsB, has minor trans-phosphatidylation activity converting PE to PG, at 118,659 to 119,930 GFF3294 GFF3295 - Endonuclease/exonuclease/phosphatase family protein, at 119,942 to 120,715 GFF3295 GFF3296 - hypothetical protein, at 120,939 to 121,370 GFF3296 GFF3297 - hypothetical protein Ajs_0007, at 121,455 to 122,009 GFF3297
Group Condition GFF3293 GFF3294 GFF3295 GFF3296 GFF3297
complex community Community=Kojac gum; Passage=4 -0.3 -0.1 +0.6 N.D. -1.6
phage phage_bap4 -0.3 -0.2 -0.0 N.D. -0.5
phage phage_bap4 -0.1 -0.3 +0.1 N.D. -0.5
complex community Community=guar; Passage=4 +0.0 +0.1 -0.6 N.D. -0.4
complex community Community=Locust bean gum; Passage=4 -0.4 +0.2 +0.3 N.D. -1.0
complex community Community=guar; Passage=4 -0.2 +0.2 +0.2 N.D. -1.0
phage phage_bap4 -0.2 -0.1 -0.2 N.D. -0.2
complex community Community=arabino-guar; Passage=4 +0.2 -0.2 -0.2 N.D. -0.4
complex community Community=Locust bean gum; Passage=4 -0.4 +0.3 -0.4 N.D. -0.1
phage phage_bap4 -0.1 -0.1 -0.1 N.D. -0.3
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 -0.2 +0.0 N.D. -0.4
complex community Community=arabino-guar; Passage=4 -0.0 -0.0 -0.7 N.D. +0.2
complex community Community=Locust bean gum; Passage=4 +0.2 +0.2 -0.1 N.D. -0.8
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.1 -0.1 -0.0 N.D. -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 -0.0 -0.3 N.D. -0.2
complex community Community=guar; Passage=4 -0.3 -0.2 +0.2 N.D. -0.0
phage phage_bap4 +0.0 +0.2 -0.2 N.D. -0.2
phage phage_bap4 -0.0 +0.0 -0.4 N.D. +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.2 +0.0 N.D. -0.3
no phage control no phage control -0.2 -0.1 +0.3 N.D. -0.2
complex community Community=arabino-guar; Passage=4 -0.1 -0.4 +0.0 N.D. +0.2
complex community Community=Kojac gum; Passage=1 -0.2 +0.1 -0.2 N.D. +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 +0.0 +0.2 N.D. -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 +0.1 +0.1 N.D. -0.2
vitamin M9 with Supernatant from Cyptococcus +0.1 +0.3 +0.2 N.D. -0.3
phage phage_bap4 -0.0 -0.0 +0.2 N.D. +0.3
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 +0.3 +0.2 N.D. +0.2
complex community Community=arabino-guar; Passage=4 +0.2 -0.2 +0.1 N.D. +0.5
complex community Community=Locust bean gum; Passage=4 +0.3 +0.2 +0.0 N.D. +0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 +0.1 +0.1 N.D. +0.5
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