Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_01665	PS417_01670	PS417_01675	PS417_01680	PS417_01685
phage	P. simiae Grant Run MOI 0.1	N.D.	-0.3	-0.0	-0.1	-1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.4	-0.4	+0.1	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.0	-0.6	-0.2	-0.4
phage	P. simiae OR Antrim MOI 10	N.D.	+0.0	+0.0	-0.2	-1.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	N.D.	-0.4	-0.3	+0.1	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	N.D.	-0.1	-0.1	+0.2	-0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	+0.1	-0.7	+0.0	-0.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	N.D.	-0.4	-0.5	-0.2	+0.2
carbon source	2'-Deoxyinosine 5 mM (C)	N.D.	-0.4	-0.3	+0.3	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	+0.0	-0.8	-0.2	+0.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	N.D.	+0.0	-1.2	-0.1	+0.8
stress	Gentamicin 0.008 mg/ml	N.D.	-0.2	+0.6	+0.2	-1.0
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	N.D.	-0.5	-0.2	-0.1	+0.5
root	root sample 6; outgrowth in LB	N.D.	+0.5	-0.6	-0.1	+0.1
phage	P. simiae OR Antrim MOI 10	N.D.	-0.4	+0.4	-0.2	+0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.1	-0.4	+0.3	+0.5
solid stress	Fraxetin 3 mM; solid stress	N.D.	+0.3	-0.6	+0.1	+0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.3	-0.1	+0.1	+0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	+0.2	-0.4	+0.3	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	N.D.	+0.1	-0.4	+0.1	+0.6
seeds	Growth on radish seeds for 72 hours	N.D.	+0.3	-0.3	-0.2	+0.9
phage	P. simiae OR1 MOI 0.1	N.D.	-0.1	+0.3	-0.4	+1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	N.D.	+0.3	-0.3	+0.1	+0.7
solid stress	Fraxetin 3 mM; solid stress	N.D.	+0.4	-0.4	+0.1	+1.1
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	N.D.	+0.1	-0.1	-0.1	+1.3
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X	N.D.	+0.5	+0.2	-0.0	+0.6
soil	soil sample 5; outgrowth in LB	N.D.	+0.6	+0.3	+0.1	+0.3
stress	1-ethyl-3-methylimidazolium chloride 200 mM	N.D.	-0.0	-0.0	+0.1	+1.2
seeds	Growth on radish seeds for 24 hours	N.D.	+0.1	+0.2	+0.2	+0.8
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	N.D.	+0.3	-0.5	+0.0	+2.1