Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF3281 and GFF3282 are separated by 28 nucleotidesGFF3282 and GFF3283 are separated by 2 nucleotidesGFF3283 and GFF3284 are separated by 11 nucleotidesGFF3284 and GFF3285 are separated by 33 nucleotides GFF3281 - Tricarboxylate transport protein TctC, at 165,594 to 166,586 GFF3281 GFF3282 - Indolepyruvate oxidoreductase subunit IorB II (EC 1.2.7.8), at 166,615 to 168,234 GFF3282 GFF3283 - Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8), at 168,237 to 170,402 GFF3283 GFF3284 - 2,4'-dihydroxyacetophenone dioxygenase, at 170,414 to 170,947 GFF3284 GFF3285 - 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100), at 170,981 to 171,751 GFF3285
Group Condition GFF3281 GFF3282 GFF3283 GFF3284 GFF3285
carbon source Ying_Others16 rep B; time point 1 -0.2 N.D. -0.6 -0.1 N.D.
carbon source Ying_sugar7 rep C; time point 2 -0.1 N.D. -0.6 -0.1 N.D.
carbon source Ying_Nucleobase14 rep C; time point 2 -0.3 N.D. -0.5 -0.1 N.D.
carbon source Ying_all64 rep B; time point 3 +0.0 N.D. -0.8 +0.1 N.D.
carbon source Ying_all64 rep C; time point 1 -0.4 N.D. -0.4 +0.0 N.D.
carbon source Ying_Nucleobase14 rep A; time point 2 -0.2 N.D. -0.5 +0.2 N.D.
carbon source Ying_OrganicAcid7 rep C; time point 2 +0.1 N.D. -0.2 -0.3 N.D.
carbon source Ying_AminoAcid20 rep B; time point 2 +0.3 N.D. -0.6 -0.2 N.D.
carbon source Ying_Nucleobase14 rep B; time point 1 -0.1 N.D. -0.5 +0.2 N.D.
carbon source Ying_Others16 rep B; time point 3 -0.1 N.D. -0.5 +0.2 N.D.
carbon source Ying_AminoAcid20 rep A; time point 2 -0.4 N.D. +0.0 -0.0 N.D.
carbon source Ying_all64 rep C; time point 3 +0.4 N.D. -0.6 -0.0 N.D.
carbon source Ying_sugar7 rep C; time point 1 -0.4 N.D. +0.0 +0.1 N.D.
carbon source Ying_Nucleobase14 rep C; time point 1 -0.1 N.D. +0.2 -0.4 N.D.
carbon source Ying_all64 rep A; time point 3 -0.2 N.D. -0.1 +0.1 N.D.
carbon source Ying_all64 rep B; time point 1 -0.1 N.D. +0.1 -0.2 N.D.
carbon source Ying_AminoAcid20 rep A; time point 3 -0.1 N.D. -0.2 +0.1 N.D.
carbon source Ying_Others16 rep A; time point 1 -0.0 N.D. +0.2 -0.2 N.D.
carbon source Ying_Others16 rep C; time point 2 -0.3 N.D. +0.1 +0.2 N.D.
carbon source Ying_AminoAcid20 rep B; time point 1 -0.1 N.D. +0.2 -0.1 N.D.
carbon source Ying_OrganicAcid7 rep B; time point 2 +0.2 N.D. +0.0 -0.2 N.D.
carbon source Ying_OrganicAcid7 rep B; time point 1 +0.2 N.D. -0.1 -0.1 N.D.
carbon source Ying_Nucleobase14 rep A; time point 1 -0.0 N.D. +0.3 -0.2 N.D.
carbon source Ying_sugar7 rep A; time point 1 -0.2 N.D. +0.2 +0.1 N.D.
carbon source Ying_AminoAcid20 rep B; time point 3 -0.2 N.D. +0.3 +0.2 N.D.
carbon source Ying_OrganicAcid7 rep A; time point 1 -0.1 N.D. +0.3 +0.0 N.D.
carbon source Ying_sugar7 rep A; time point 3 -0.1 N.D. +0.1 +0.2 N.D.
carbon source Ying_OrganicAcid7 rep A; time point 3 +0.2 N.D. +0.1 +0.1 N.D.
carbon source Ying_OrganicAcid7 rep C; time point 1 +0.2 N.D. +0.5 -0.2 N.D.
carbon source Ying_AminoAcid20 rep A; time point 1 -0.1 N.D. +0.6 +0.0 N.D.
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