Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3275 and GFF3276 are separated by 75 nucleotidesGFF3276 and GFF3277 overlap by 4 nucleotidesGFF3277 and GFF3278 overlap by 4 nucleotidesGFF3278 and GFF3279 are separated by 101 nucleotides GFF3275 - tRNA-5-carboxymethylaminomethyl-2-thiouridine(34) synthesis protein MnmE, at 94,871 to 96,277 GFF3275 GFF3276 - Inner membrane protein translocase and chaperone YidC, long form, at 96,353 to 98,038 GFF3276 GFF3277 - Membrane protein insertion efficiency factor YidD, at 98,035 to 98,322 GFF3277 GFF3278 - Ribonuclease P protein component (EC 3.1.26.5), at 98,319 to 98,741 GFF3278 GFF3279 - LSU ribosomal protein L34p, at 98,843 to 98,977 GFF3279
Group Condition GFF3275 GFF3276 GFF3277 GFF3278 GFF3279
complex community Community=guar; Passage=4 N.D. N.D. -1.9 N.D. N.D.
complex community Community=guar; Passage=4 N.D. N.D. -1.5 N.D. N.D.
complex community Community=arabino-guar; Passage=4 N.D. N.D. -1.3 N.D. N.D.
complex community Community=Kojac gum; Passage=4 N.D. N.D. -1.2 N.D. N.D.
complex community Community=Locust bean gum; Passage=4 N.D. N.D. -1.1 N.D. N.D.
complex community Community=Locust bean gum; Passage=4 N.D. N.D. -1.0 N.D. N.D.
complex community Community=arabino-guar; Passage=4 N.D. N.D. -0.8 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. N.D. -0.8 N.D. N.D.
complex community Community=guar; Passage=4 N.D. N.D. -0.7 N.D. N.D.
complex community Community=arabino-guar; Passage=4 N.D. N.D. -0.7 N.D. N.D.
phage phage_bap4 N.D. N.D. -0.7 N.D. N.D.
phage phage_bap4 N.D. N.D. -0.7 N.D. N.D.
complex community Community=arabino-guar; Passage=4 N.D. N.D. -0.6 N.D. N.D.
complex community Community=guar; Passage=4 N.D. N.D. -0.6 N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. -0.6 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. N.D. -0.5 N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. N.D. -0.5 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. N.D. -0.5 N.D. N.D.
phage phage_bap4 N.D. N.D. -0.5 N.D. N.D.
no phage control no phage control N.D. N.D. -0.5 N.D. N.D.
complex community Community=Locust bean gum; Passage=4 N.D. N.D. -0.5 N.D. N.D.
phage phage_bap4 N.D. N.D. -0.5 N.D. N.D.
phage phage_bap4 N.D. N.D. -0.4 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. N.D. -0.4 N.D. N.D.
complex community Community=Locust bean gum; Passage=4 N.D. N.D. -0.4 N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. N.D. -0.4 N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. N.D. -0.4 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. N.D. -0.4 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. N.D. -0.4 N.D. N.D.
no phage control no phage control N.D. N.D. -0.3 N.D. N.D.
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