Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF3270 and GFF3271 are separated by 53 nucleotidesGFF3271 and GFF3272 are separated by 91 nucleotidesGFF3272 and GFF3273 are separated by 133 nucleotidesGFF3273 and GFF3274 overlap by 8 nucleotides GFF3270 - Two-component response regulator, at 153,504 to 154,517 GFF3270 GFF3271 - Sensor histidine kinase, at 154,571 to 155,896 GFF3271 GFF3272 - DNA-binding response regulator, LuxR family, at 155,988 to 156,623 GFF3272 GFF3273 - Carbon starvation protein A, at 156,757 to 158,829 GFF3273 GFF3274 - COG2879, Hypothetical small protein yjiX, at 158,822 to 159,043 GFF3274
Group Condition GFF3270 GFF3271 GFF3272 GFF3273 GFF3274
carbon source Ying_OrganicAcid7 rep C; time point 3 +0.7 -0.6 -1.0 -0.8 -0.6
carbon source Ying_OrganicAcid7 rep B; time point 2 -0.4 -0.5 -0.6 -0.4 -0.3
carbon source Ying_OrganicAcid7 rep C; time point 2 +0.1 -0.7 -0.5 -0.3 -0.6
carbon source Ying_OrganicAcid7 rep B; time point 3 -0.1 -0.4 -0.3 -0.6 -0.7
carbon source Ying_OrganicAcid7 rep A; time point 2 -0.0 -0.4 -0.7 -0.2 -0.6
carbon source Ying_OrganicAcid7 rep A; time point 3 +0.7 -0.3 -0.5 -0.9 -0.6
carbon source Ying_OrganicAcid7 rep A; time point 1 -0.0 -0.4 -0.5 -0.2 -0.3
carbon source Ying_OrganicAcid7 rep C; time point 1 -0.2 -0.3 -0.1 -0.4 -0.3
carbon source Ying_OrganicAcid7 rep B; time point 1 +0.2 -0.2 -0.5 +0.0 -0.6
carbon source Ying_all64 rep C; time point 3 -0.8 +0.5 -0.3 +0.5 -0.6
carbon source Ying_Others16 rep A; time point 1 +0.1 -0.2 -0.4 +0.1 -0.3
carbon source Ying_AminoAcid20 rep A; time point 3 +0.1 +0.1 -0.6 -0.0 +0.2
carbon source Ying_all64 rep B; time point 1 +0.3 -0.3 -0.3 +0.2 -0.1
carbon source Ying_all64 rep B; time point 3 -0.1 +0.2 -0.6 +0.1 +0.2
carbon source Ying_sugar7 rep A; time point 2 -0.7 +0.2 -0.0 +0.3 +0.1
carbon source Ying_sugar7 rep B; time point 1 -0.9 +0.2 +0.1 +0.2 +0.4
carbon source Ying_Nucleobase14 rep C; time point 1 +0.1 -0.1 -0.5 +0.3 +0.2
carbon source Ying_Others16 rep A; time point 3 +0.5 -0.1 -0.4 +0.0 +0.1
carbon source Ying_AminoAcid20 rep B; time point 2 -0.6 +0.4 -0.1 +0.2 +0.3
carbon source Ying_Nucleobase14 rep A; time point 2 -0.3 +0.1 -0.1 +0.4 +0.2
carbon source Ying_all64 rep A; time point 2 -0.0 +0.3 -0.6 +0.2 +0.3
carbon source Ying_AminoAcid20 rep A; time point 1 -0.3 +0.1 -0.2 +0.3 +0.5
carbon source Ying_AminoAcid20 rep B; time point 1 +0.4 -0.1 -0.1 +0.2 +0.3
carbon source Ying_Others16 rep B; time point 1 +0.2 -0.2 +0.3 +0.2 +0.2
carbon source Ying_all64 rep C; time point 2 +0.5 +0.3 -0.2 +0.3 -0.1
carbon source Ying_sugar7 rep A; time point 1 +0.2 +0.1 -0.2 +0.4 +0.4
carbon source Ying_Nucleobase14 rep B; time point 1 -0.2 +0.3 +0.3 +0.4 +0.3
carbon source Ying_Nucleobase14 rep C; time point 2 +0.2 +0.4 +0.0 +0.4 +0.2
carbon source Ying_Others16 rep B; time point 3 +0.7 +0.2 -0.0 +0.2 +0.2
carbon source Ying_Nucleobase14 rep B; time point 2 +0.3 +0.3 +0.2 +0.4 +0.3
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