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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF3259 and GFF3260 are separated by 68 nucleotides
GFF3260 and GFF3261 are separated by 9 nucleotides
GFF3261 and GFF3262 are separated by 75 nucleotides
GFF3262 and GFF3263 overlap by 4 nucleotides
GFF3259 - NADH:flavin oxidoreductases, Old Yellow Enzyme family, at 3,314,854 to 3,315,945
GFF3259
GFF3260 - hypothetical protein, at 3,316,014 to 3,316,895
GFF3260
GFF3261 - RIKEN cDNA 2310005O14, at 3,316,905 to 3,317,570
GFF3261
GFF3262 - FeoA, at 3,317,646 to 3,317,903
GFF3262
GFF3263 - Ferrous iron transporter FeoB, at 3,317,900 to 3,319,756
GFF3263
Group
Condition
GFF3259
GFF3260
GFF3261
GFF3262
GFF3263
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
-0.1
-0.2
-0.6
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.1
-0.1
-0.4
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.0
-0.1
-0.5
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
-0.1
-0.6
+0.0
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.0
+0.3
-0.3
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.0
-0.0
-0.0
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
-0.2
+0.0
+0.2
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
-0.1
-0.8
+0.6
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.0
+0.1
+0.4
-0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.0
-0.5
+0.4
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
+0.0
+0.0
-0.1
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
-0.2
+0.0
+0.1
+0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.0
-0.0
+0.2
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.5
+0.0
+0.1
+0.6
+0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.0
+0.1
+0.6
+0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
+0.1
-0.2
+0.9
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.0
-0.0
+1.2
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.1
+0.4
+0.7
+0.2
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