Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3257 and GFF3258 are separated by 101 nucleotidesGFF3258 and GFF3259 overlap by 29 nucleotidesGFF3259 and GFF3260 overlap by 4 nucleotidesGFF3260 and GFF3261 are separated by 91 nucleotides GFF3257 - hypothetical protein, at 75,804 to 76,262 GFF3257 GFF3258 - hypothetical protein, at 76,364 to 79,288 GFF3258 GFF3259 - Lysophospholipase (EC 3.1.1.5); Monoglyceride lipase (EC 3.1.1.23), at 79,260 to 80,120 GFF3259 GFF3260 - Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases, at 80,117 to 81,628 GFF3260 GFF3261 - FIG003003: hypothetical protein, at 81,720 to 82,499 GFF3261
Group Condition GFF3257 GFF3258 GFF3259 GFF3260 GFF3261
phage phage_bap4 N.D. -0.3 -0.3 -0.3 -0.2
phage phage_bap4 N.D. -0.2 -0.2 -0.2 -0.3
phage phage_bap4 N.D. -0.2 -0.1 -0.2 -0.2
phage phage_bap4 N.D. -0.2 +0.1 -0.1 -0.2
complex community Community=Locust bean gum; Passage=4 N.D. +0.2 -0.3 -0.0 -0.2
complex community Community=arabino-guar; Passage=4 N.D. -0.1 -0.5 +0.4 -0.1
vitamin M9 with Supernatant from Cyptococcus N.D. -0.1 -0.4 +0.0 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. +0.1 -0.2 -0.2 +0.1
phage phage_bap4 N.D. -0.2 +0.1 +0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.1 -0.2 -0.1 +0.2
complex community Community=arabino-guar; Passage=4 N.D. -0.2 -0.1 -0.1 +0.4
complex community Community=guar; Passage=4 N.D. +0.1 +0.6 -0.1 -0.6
phage phage_bap4 N.D. -0.2 +0.1 +0.2 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.1 -0.2 -0.0 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.1 -0.0 -0.1 +0.2
phage phage_bap4 N.D. -0.2 +0.2 +0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.0 +0.2 -0.2 +0.2
complex community Community=Locust bean gum; Passage=4 N.D. +0.2 +0.1 +0.1 -0.2
complex community Community=Kojac gum; Passage=4 N.D. +0.4 -0.1 -0.2 +0.2
complex community Community=arabino-guar; Passage=4 N.D. -0.1 +0.1 -0.0 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.0 +0.1 -0.1 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.1 +0.1 -0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. +0.1 -0.1 +0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. +0.1 +0.0 -0.1 +0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. +0.1 -0.1 +0.1 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. +0.2 +0.1 -0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.1 +0.2 +0.1 +0.1
complex community Community=Locust bean gum; Passage=1 N.D. +0.1 +0.1 -0.0 +0.3
no phage control no phage control N.D. -0.1 +0.4 +0.0 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.0 +0.2 +0.0 +0.3
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