Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3253 and GFF3254 are separated by 236 nucleotidesGFF3254 and GFF3255 are separated by 69 nucleotidesGFF3255 and GFF3256 are separated by 83 nucleotidesGFF3256 and GFF3257 are separated by 101 nucleotides GFF3253 - LPS-assembly protein LptD @ Organic solvent tolerance protein precursor, at 69,528 to 72,122 GFF3253 GFF3254 - Phosphotransferase involved in threonylcarbamoyladenosine t(6)A37 formation in tRNA, at 72,359 to 73,456 GFF3254 GFF3255 - 16S rRNA (uracil(1498)-N(3))-methyltransferase (EC 2.1.1.193), at 73,526 to 74,263 GFF3255 GFF3256 - Peptidase, M20/M25/M40 family, at 74,347 to 75,702 GFF3256 GFF3257 - hypothetical protein, at 75,804 to 76,262 GFF3257
Group Condition GFF3253 GFF3254 GFF3255 GFF3256 GFF3257
complex community Community=arabino-guar; Passage=4 N.D. -0.0 -1.5 -0.4 N.D.
vitamin M9 with Supernatant from Cyptococcus N.D. -1.6 -0.1 -0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -1.0 -0.5 +0.0 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -1.1 -0.4 +0.1 N.D.
vitamin M9 with Supernatant from Cyptococcus N.D. -1.0 -0.3 -0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -1.3 +0.1 -0.2 N.D.
vitamin M9 with Supernatant from Cyptococcus N.D. -1.2 -0.0 -0.1 N.D.
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. -1.3 +0.1 -0.1 N.D.
phage phage_bap4 N.D. -0.3 -0.8 -0.2 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -1.2 -0.0 +0.0 N.D.
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. -1.3 +0.1 +0.1 N.D.
phage phage_bap4 N.D. -0.4 -0.5 -0.2 N.D.
complex community Community=Locust bean gum; Passage=4 N.D. -0.1 -1.1 +0.1 N.D.
vitamin M9 with Supernatant from Cyptococcus N.D. -1.0 +0.1 -0.2 N.D.
vitamin M9 with Supernatant from Cyptococcus N.D. -1.2 +0.2 -0.0 N.D.
complex community Community=guar; Passage=4 N.D. +0.1 -1.0 -0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.9 +0.0 -0.1 N.D.
phage phage_bap4 N.D. -0.2 -0.5 -0.3 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -1.1 +0.1 +0.1 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -1.2 +0.3 +0.0 N.D.
complex community Community=Kojac gum; Passage=4 N.D. -0.0 -1.0 +0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.8 +0.1 -0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.8 -0.1 +0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -1.1 +0.1 +0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.9 +0.2 -0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. -0.8 +0.3 -0.0 N.D.
complex community Community=Locust bean gum; Passage=4 N.D. +0.2 -0.2 -0.5 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. +0.3 -0.8 +0.1 N.D.
complex community Community=guar; Passage=4 N.D. +0.2 -0.6 +0.2 N.D.
complex community Community=guar; Passage=4 N.D. +0.2 -0.3 +0.4 N.D.
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