Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF3241 and GFF3242 are separated by 16 nucleotidesGFF3242 and GFF3243 are separated by 152 nucleotidesGFF3243 and GFF3244 are separated by 10 nucleotidesGFF3244 and GFF3245 overlap by 4 nucleotides GFF3241 - hypothetical protein, at 55,234 to 55,698 GFF3241 GFF3242 - FIG00444883: hypothetical protein, at 55,715 to 57,067 GFF3242 GFF3243 - Flavin containing amine oxidoreductase, at 57,220 to 58,851 GFF3243 GFF3244 - Spermidine synthase N-terminal extension / Spermidine synthase (EC 2.5.1.16), at 58,862 to 60,505 GFF3244 GFF3245 - hypothetical protein, at 60,502 to 60,720 GFF3245
Group Condition GFF3241 GFF3242 GFF3243 GFF3244 GFF3245
complex community Community=Locust bean gum; Passage=4 -2.5 -0.1 -0.4 -0.1 +0.3
complex community Community=Locust bean gum; Passage=4 -1.3 +0.0 -0.7 -0.1 +0.2
complex community Community=arabino-guar; Passage=4 -0.2 -0.1 +0.2 -0.1 -0.9
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.5 +0.2 -0.2 +0.0 -0.6
complex community Community=guar; Passage=4 +0.1 -0.2 -0.9 +0.0 +0.0
phage phage_bap4 +0.1 -0.0 -0.5 -0.2 -0.3
complex community Community=arabino-guar; Passage=4 +0.4 -0.4 -0.4 +0.1 -0.7
complex community Community=Locust bean gum; Passage=4 -0.5 -0.3 -0.2 -0.1 +0.1
complex community Community=Locust bean gum; Passage=4 +1.1 -0.5 -1.7 +0.5 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.6 -0.0 -0.2 -0.0 -0.0
complex community Community=Kojac gum; Passage=4 -0.6 +0.0 -0.6 -0.1 +0.3
complex community Community=guar; Passage=4 -0.0 -0.6 +0.1 -0.1 -0.3
phage phage_bap4 -0.5 +0.1 -0.3 +0.1 -0.1
phage phage_bap4 +0.1 +0.1 -0.2 -0.3 -0.3
phage phage_bap4 +0.3 +0.1 -0.3 -0.0 -0.5
complex community Community=arabino-guar; Passage=4 -0.5 +0.6 -0.2 +0.3 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.7 +0.2 +0.1 +0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.3 -0.2 +0.1 +0.3 +0.1
phage phage_bap4 +0.1 +0.3 -0.0 +0.1 -0.4
complex community Community=Kojac gum; Passage=1 +0.6 -0.1 -0.1 +0.1 -0.4
phage phage_bap4 +0.7 +0.0 -0.2 -0.0 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.3 -0.0 -0.1 -0.3 +0.4
complex community Community=Locust bean gum; Passage=1 +0.8 -0.0 -0.3 +0.1 -0.2
no phage control no phage control +0.3 +0.3 -0.2 +0.0 +0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.6 -0.1 +0.2 -0.2 +0.0
complex community Community=arabino-guar; Passage=4 +0.8 -0.1 -0.0 -0.2 +0.0
vitamin M9 with Supernatant from Cyptococcus +0.6 -0.1 +0.0 +0.1 +0.0
complex community Community=guar; Passage=4 +1.1 +0.2 +0.2 +0.1 -0.9
vitamin M9 with calcium pantothenate 10 mg/mL +0.6 -0.1 +0.1 +0.2 -0.0
complex community Community=guar; Passage=4 +0.5 +0.2 -0.2 +0.3 +0.0
remove
GFF3241
plot		 remove
GFF3242
plot		 remove
GFF3243		 remove
GFF3244
plot		 remove
GFF3245
plot