Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF322 and GFF323 overlap by 4 nucleotidesGFF323 and GFF324 are separated by 38 nucleotidesGFF324 and GFF325 are separated by 154 nucleotidesGFF325 and GFF326 are separated by 52 nucleotides GFF322 - GTP cyclohydrolase II homolog, at 354,009 to 355,151 GFF322 GFF323 - Possible pyrimidine-degrading protein DUF1688, at 355,148 to 356,554 GFF323 GFF324 - Uracil phosphoribosyltransferase (EC 2.4.2.9), at 356,593 to 357,222 GFF324 GFF325 - Nucleoside ABC transporter, substrate-binding protein, at 357,377 to 358,381 GFF325 GFF326 - Polysaccharide deacetylase, caspase activity, at 358,434 to 361,211 GFF326
Group Condition GFF322 GFF323 GFF324 GFF325 GFF326
complex community Community=Locust bean gum; Passage=4 +0.1 -0.7 -0.1 -0.4 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.2 -0.2 +0.0 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.0 -0.3 -0.1 -0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 -0.0 -0.1 -0.0 -0.1
vitamin M9 with Supernatant from Cyptococcus -0.5 +0.0 -0.1 -0.0 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 -0.1 -0.1 -0.0 -0.1
complex community Community=arabino-guar; Passage=4 +0.2 -0.6 -0.5 +0.1 +0.3
vitamin M9 with Supernatant from Cyptococcus -0.1 -0.2 -0.0 -0.1 +0.2
complex community Community=guar; Passage=4 +0.0 -0.5 -0.1 -0.0 +0.3
complex community Community=Locust bean gum; Passage=1 +0.1 -0.1 -0.1 -0.1 +0.1
phage phage_bap4 -0.1 +0.2 -0.1 +0.1 -0.2
vitamin M9 with Supernatant from Cyptococcus -0.3 +0.0 +0.1 -0.0 +0.2
phage phage_bap4 -0.2 +0.3 +0.0 -0.0 -0.1
complex community Community=guar; Passage=4 +0.2 -0.4 -0.2 +0.2 +0.1
complex community Community=guar; Passage=4 -0.1 +0.3 -0.4 +0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 +0.2 -0.1 +0.0 +0.1
complex community Community=Locust bean gum; Passage=4 +0.4 -0.2 -0.2 +0.2 -0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.1 +0.2 +0.1 -0.1 +0.1
complex community Community=arabino-guar; Passage=4 +0.4 -0.2 +0.2 -0.1 -0.0
phage phage_bap4 +0.0 +0.2 -0.1 +0.1 -0.1
complex community Community=Locust bean gum; Passage=4 -0.1 -0.0 -0.1 +0.3 +0.2
complex community Community=guar; Passage=4 +0.0 +0.2 -0.4 +0.1 +0.4
no phage control no phage control +0.2 -0.1 +0.1 +0.2 -0.1
complex community Community=Kojac gum; Passage=4 +0.2 +0.1 -0.2 -0.2 +0.4
complex community Community=Locust bean gum; Passage=4 +0.3 -0.1 -0.0 +0.0 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 +0.4 +0.1 -0.0 -0.0
phage phage_bap4 +0.0 +0.3 +0.1 +0.1 +0.1
no phage control no phage control +0.1 +0.2 +0.1 +0.1 +0.1
no phage control no phage control +0.1 +0.2 +0.1 +0.2 +0.0
complex community Community=arabino-guar; Passage=4 +0.4 +0.1 -0.2 +0.4 -0.0
remove
GFF322
plot		 remove
GFF323
plot		 remove
GFF324		 remove
GFF325
plot		 remove
GFF326
plot