Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_16545	PS417_16550	PS417_16555	PS417_16560	PS417_16565
solid stress	Fraxetin 3 mM; solid stress	N.D.	N.D.	-2.7	-1.3	-1.1
solid stress	Fraxetin 0.5 mM; solid stress	N.D.	N.D.	-3.9	-0.6	-0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	N.D.	N.D.	-3.5	-1.2	-0.1
solid stress	Scopoletin 2 mM; solid stress	N.D.	N.D.	-4.0	-0.4	-0.3
liquid stress	Scopoletin 3 mM; liquid stress	N.D.	N.D.	-3.6	-0.9	+0.0
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	N.D.	N.D.	-3.1	-0.6	-0.7
solid stress	80% Methanol 2 mM; solid stress	N.D.	N.D.	-3.8	-0.3	-0.2
liquid stress	80% Methanol 2 mM; liquid stress	N.D.	N.D.	-3.5	-0.5	-0.1
solid stress	80% Methanol 2 mM; solid stress	N.D.	N.D.	-1.9	-1.9	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	N.D.	N.D.	-4.6	+0.5	+0.1
solid stress	80% Methanol 3 mM; solid stress	N.D.	N.D.	-3.9	-0.1	-0.0
liquid stress	Scopoletin 2 mM; liquid stress	N.D.	N.D.	-3.0	-0.8	-0.2
liquid stress	80% Methanol 3 mM; liquid stress	N.D.	N.D.	-3.1	-1.0	+0.2
soil	soil sample 4; outgrowth in LB	N.D.	N.D.	-2.8	-0.6	-0.5
solid stress	Scopoletin 2 mM; solid stress	N.D.	N.D.	-2.9	-0.8	+0.1
agar plate interaction control	Taped volatile agar plate with no fungus	N.D.	N.D.	-2.3	-0.9	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	N.D.	-2.1	-1.1	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	N.D.	N.D.	-4.1	+1.0	-0.4
phage	P. simiae Grant Run MOI 0.1	N.D.	N.D.	-3.3	+0.5	-0.5
phage	P. simiae OR1 MOI 0.1	N.D.	N.D.	-3.6	-0.0	+0.5
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	N.D.	N.D.	-2.5	+0.5	-1.0
soil	soil sample 2; outgrowth in LB	N.D.	N.D.	-2.2	-1.6	+1.0
soil	soil sample 7; outgrowth in LB	N.D.	N.D.	-3.1	+0.5	-0.0
soil	soil sample 3; outgrowth in LB	N.D.	N.D.	-3.7	+0.7	+0.5
phage	JP1 MOI 10	N.D.	N.D.	-2.0	+1.2	+0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	N.D.	N.D.	+1.5	+0.9	-1.4
stress	Neomycin 0.04 mg/ml	N.D.	N.D.	+3.3	-0.5	-0.3
carbon source	2'-Deoxyinosine 5 mM (C)	N.D.	N.D.	+2.1	+1.2	-0.7
stress	Nalidixic 0.025 mg/ml	N.D.	N.D.	+3.0	+0.6	+0.3
stress	Gentamicin 0.008 mg/ml	N.D.	N.D.	+7.0	+1.7	+1.7