Fitness for 5 genes in Pseudomonas simiae WCS417

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500 ntPS417_16465 and PS417_16470 are separated by 0 nucleotidesPS417_16470 and PS417_16475 are separated by 16 nucleotidesPS417_16475 and PS417_16480 overlap by 1 nucleotidesPS417_16480 and PS417_16485 are separated by 10 nucleotides PS417_16465: PS417_16465 - sirohydrochlorin ferrochelatase, at 3,596,308 to 3,597,702 _16465 PS417_16470: PS417_16470 - seryl-tRNA synthetase, at 3,597,703 to 3,598,983 _16470 PS417_16475: PS417_16475 - camphor resistance protein CrcB, at 3,599,000 to 3,599,374 _16475 PS417_16480: PS417_16480 - recombination factor protein RarA, at 3,599,374 to 3,600,696 _16480 PS417_16485: PS417_16485 - membrane protein, at 3,600,707 to 3,601,330 _16485
Group Condition PS417_16465 PS417_16470 PS417_16475 PS417_16480 PS417_16485
carbon source L-Asparagine (C) -6.4 N.D. +0.1 -0.0 N.D.
carbon source Xylitol (C) -6.0 N.D. -0.2 +0.0 N.D.
carbon source NAG (C) -6.3 N.D. +0.0 +0.0 N.D.
carbon source Cytidine (C) -5.9 N.D. -0.2 -0.1 N.D.
carbon source NAG (C) -5.4 N.D. -0.5 -0.2 N.D.
carbon source Uridine (C) -5.6 N.D. -0.4 +0.0 N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -4.6 N.D. -0.8 -0.5 N.D.
carbon source L-Valine (C) -5.0 N.D. -1.3 +0.4 N.D.
carbon source Putrescine (C) -5.0 N.D. -0.8 -0.1 N.D.
carbon source L-Isoleucine (C) -5.8 N.D. -0.2 +0.0 N.D.
carbon source L-Glutamine (C) -5.8 N.D. -0.2 +0.1 N.D.
carbon source Uridine (C) -5.6 N.D. -0.1 +0.0 N.D.
carbon source D,L-Lactate (C) -5.3 N.D. -0.0 -0.2 N.D.
carbon source D-Ribose (C) -4.9 N.D. -0.5 -0.0 N.D.
carbon source Putrescine (C) -5.1 N.D. -0.3 +0.0 N.D.
nitrogen source Ammonium chloride (N) -5.3 N.D. +0.0 -0.0 N.D.
stress methylglyoxal 0.032 vol% +0.3 N.D. +0.3 -5.9 N.D.
carbon source L-Malic (C) -5.2 N.D. -0.1 +0.0 N.D.
carbon source D-Galactose (C) -5.3 N.D. +0.1 -0.0 N.D.
carbon source a-Ketoglutaric (C) -5.3 N.D. +0.0 +0.0 N.D.
carbon source 2-Deoxy-D-Ribose (C) -5.3 N.D. +0.2 -0.1 N.D.
nitrogen source Adenine (N) -4.8 N.D. -0.0 -0.4 N.D.
carbon source octanoate (C) -4.9 N.D. -0.2 -0.1 N.D.
carbon source D-Glucose (C) -5.1 N.D. -0.1 +0.1 N.D.
nitrogen source Adenosine (N) -5.0 N.D. -0.2 +0.1 N.D.
carbon source Inosine (C) -4.5 N.D. -0.6 +0.1 N.D.
carbon source octanoate (C) -5.1 N.D. +0.2 -0.2 N.D.
carbon source L-Asparagine (C) -5.0 N.D. +0.2 -0.0 N.D.
carbon source 2-Deoxy-D-Ribose (C) -4.8 N.D. +0.4 -0.0 N.D.
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -4.6 N.D. +0.6 -0.1 N.D.
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