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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF3202 and GFF3203 are separated by 117 nucleotides
GFF3203 and GFF3204 are separated by 101 nucleotides
GFF3204 and GFF3205 are separated by 120 nucleotides
GFF3205 and GFF3206 are separated by 4 nucleotides
GFF3202 - hypothetical protein, at 3,261,533 to 3,261,718
GFF3202
GFF3203 - hypothetical protein, at 3,261,836 to 3,261,934
GFF3203
GFF3204 - FIG003003: hypothetical protein, at 3,262,036 to 3,262,785
GFF3204
GFF3205 - Uncharacterized membrane protein SO_4740, at 3,262,906 to 3,263,142
GFF3205
GFF3206 - Peptidyl-prolyl cis-trans isomerase PpiA precursor (EC 5.2.1.8), at 3,263,147 to 3,263,821
GFF3206
Group
Condition
GFF3202
GFF3203
GFF3204
GFF3205
GFF3206
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.3
-2.1
+0.1
+0.2
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
-1.6
-0.0
+0.3
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
-1.7
+0.1
+0.5
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.4
-0.1
-0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.3
-0.3
+0.1
-0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.6
+0.0
-0.1
-0.6
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.1
+0.2
-0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
-0.1
-0.1
+0.2
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.2
-0.0
+0.2
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.3
+0.3
+0.1
-0.3
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.2
+0.1
+0.3
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
+0.2
-0.0
+0.2
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.4
+0.2
+0.4
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
+0.1
+0.1
+0.4
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.3
+0.0
-0.1
+0.4
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
+0.1
+0.1
+0.4
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.3
-0.0
+0.6
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.3
+0.6
+0.2
+0.4
+0.0
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