Fitness for 5 genes in Pseudomonas simiae WCS417

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500 ntPS417_01620 and PS417_01625 are separated by 119 nucleotidesPS417_01625 and PS417_01630 overlap by 2 nucleotidesPS417_01630 and PS417_01635 are separated by 532 nucleotidesPS417_01635 and PS417_01640 overlap by 4 nucleotides PS417_01620: PS417_01620 - preprotein translocase subunit SecB, at 356,143 to 356,622 _01620 PS417_01625: PS417_01625 - rRNA methylase, at 356,742 to 357,197 _01625 PS417_01630: PS417_01630 - hypothetical protein, at 357,196 to 357,636 _01630 PS417_01635: PS417_01635 - nitrogen regulation protein NR(I), at 358,169 to 359,605 _01635 PS417_01640: PS417_01640 - histidine kinase, at 359,602 to 360,687 _01640
Group Condition PS417_01620 PS417_01625 PS417_01630 PS417_01635 PS417_01640
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.0 N.D. -1.1 -9.1 -5.9
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 N.D. -0.1 -8.4 -6.5
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 N.D. +0.6 -9.1 -5.9
nitrogen source Uridine (N) -0.2 N.D. -0.1 -8.4 -6.5
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 N.D. +0.9 -8.7 -6.4
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 N.D. +0.5 -8.5 -6.2
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.0 N.D. +0.5 -8.2 -6.4
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 N.D. +0.3 -6.6 -6.6
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.9 N.D. -0.2 -6.1 -5.5
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 N.D. +0.6 -6.7 -6.5
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.7 N.D. +0.3 -6.8 -5.0
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.4 N.D. +0.8 -6.2 -6.3
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.0 N.D. +0.9 -9.1 -4.6
nitrogen source Cytidine (N) -0.4 N.D. +0.7 -8.3 -4.7
nitrogen source Cytosine (N) +0.0 N.D. +0.2 -6.7 -6.3
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.7 N.D. -0.7 -4.4 -5.7
nitrogen source Inosine (N) -0.3 N.D. -0.2 -6.1 -5.7
nitrogen source Urea (N) -0.2 N.D. -0.2 -6.3 -5.5
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 N.D. -0.1 -5.3 -5.8
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 N.D. -1.1 -5.3 -4.5
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.1 N.D. -0.4 -4.7 -6.2
nitrogen source nitrate (N) -0.2 N.D. -0.3 -5.5 -5.4
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.0 N.D. -0.1 -6.5 -4.5
nitrogen source Glycine (N) -0.5 N.D. -0.1 -4.7 -4.9
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.4 N.D. +0.2 -4.4 -4.5
nitrogen source Putrescine (N) +0.5 N.D. -0.3 -4.9 -3.2
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.2 N.D. -0.6 -3.7 -3.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.6 N.D. -0.8 -3.2 -2.6
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 N.D. +0.4 -4.0 -2.1
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 N.D. +5.2 +0.1 -0.5
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