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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF3188 and GFF3189 are separated by 91 nucleotides
GFF3189 and GFF3190 are separated by 555 nucleotides
GFF3190 and GFF3191 are separated by 347 nucleotides
GFF3191 and GFF3192 are separated by 77 nucleotides
GFF3188 - hypothetical protein, at 3,249,174 to 3,249,668
GFF3188
GFF3189 - Spermidine synthase (EC 2.5.1.16), at 3,249,760 to 3,250,434
GFF3189
GFF3190 - hypothetical protein, at 3,250,990 to 3,251,553
GFF3190
GFF3191 - SSU ribosomal protein S13p (S18e), at 3,251,901 to 3,252,269
GFF3191
GFF3192 - SSU ribosomal protein S11p (S14e), at 3,252,347 to 3,252,736
GFF3192
Group
Condition
GFF3188
GFF3189
GFF3190
GFF3191
GFF3192
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
-0.4
-0.2
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
-0.7
+0.3
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
-0.4
+0.0
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
-0.2
-0.0
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
-0.1
-0.1
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
-0.2
+0.1
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
-0.2
+0.1
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
-0.2
+0.2
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
-0.3
+0.3
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
-0.2
+0.2
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
+0.1
-0.0
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
+0.0
+0.1
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
+0.3
-0.1
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
-0.0
+0.2
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
+0.2
-0.0
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
+0.2
+0.1
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
+0.1
+0.2
N.D.
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
-0.2
+0.5
N.D.
N.D.
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