Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF317 and GFF318 are separated by 98 nucleotidesGFF318 and GFF319 are separated by 17 nucleotidesGFF319 and GFF320 overlap by 4 nucleotidesGFF320 and GFF321 overlap by 19 nucleotides GFF317 - Acyl carrier protein, at 350,554 to 350,865 GFF317 GFF318 - Uncharacterized protein YjgR, at 350,964 to 352,481 GFF318 GFF319 - EXTRACYTOPLASMIC FUNCTION ALTERNATIVE SIGMA FACTOR, at 352,499 to 353,140 GFF319 GFF320 - RNA polymerase ECF-type sigma factor, at 353,137 to 353,727 GFF320 GFF321 - hypothetical protein, at 353,709 to 353,975 GFF321
Group Condition GFF317 GFF318 GFF319 GFF320 GFF321
complex community Community=arabino-guar; Passage=4 -2.8 +0.2 -0.1 +0.1 +0.4
complex community Community=arabino-guar; Passage=4 -2.0 +0.2 +0.2 +0.2 -0.5
complex community Community=Kojac gum; Passage=4 -0.6 -0.2 -0.2 +0.2 -0.7
vitamin M9 with Supernatant from Cyptococcus -1.4 +0.1 +0.1 -0.0 -0.2
complex community Community=guar; Passage=4 -1.7 +0.0 +0.3 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.8 -0.1 -0.1 -0.2 +0.1
complex community Community=Locust bean gum; Passage=4 -0.7 +0.1 +0.1 -0.7 +0.2
phage phage_bap4 -0.8 -0.1 -0.1 +0.2 -0.1
complex community Community=Locust bean gum; Passage=1 -0.3 -0.1 +0.2 -0.4 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL -0.6 +0.1 +0.0 -0.4 +0.1
complex community Community=Locust bean gum; Passage=4 -1.5 +0.3 -0.3 +0.5 +0.2
complex community Community=arabino-guar; Passage=4 -0.1 +0.3 -0.2 -0.5 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.4 +0.0 +0.3 -0.4 +0.0
phage phage_bap4 -0.2 -0.1 -0.1 +0.4 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 -0.1 +0.3 -0.3 +0.1
complex community Community=guar; Passage=4 -0.6 +0.3 -0.2 +0.4 -0.1
complex community Community=guar; Passage=4 +0.3 +0.0 +0.2 +0.2 -0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.6 -0.1 -0.2 -0.1 -0.2
complex community Community=guar; Passage=4 -0.5 +0.2 -0.0 +0.4 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.6 -0.1 +0.1 -0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.6 +0.0 +0.2 -0.1 -0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.7 -0.0 +0.3 -0.3 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.6 +0.1 +0.1 -0.2 -0.1
vitamin M9 with Supernatant from Cyptococcus +0.6 +0.0 +0.2 +0.1 -0.3
complex community Community=arabino-guar; Passage=4 +0.8 +0.0 +0.2 -0.5 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.5 +0.0 +0.2 -0.1 -0.1
complex community Community=Locust bean gum; Passage=4 -0.4 +0.2 +0.3 +0.3 +0.2
complex community Community=Locust bean gum; Passage=4 +0.7 +0.4 -0.1 -0.6 +0.2
vitamin M9 with Supernatant from Cyptococcus +0.7 -0.2 +0.1 +0.1 -0.0
phage phage_bap4 +0.7 -0.1 -0.1 +0.3 -0.1
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