Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF3172 and GFF3173 are separated by 32 nucleotidesGFF3173 and GFF3174 are separated by 106 nucleotidesGFF3174 and GFF3175 are separated by 59 nucleotidesGFF3175 and GFF3176 are separated by 18 nucleotides GFF3172 - Glycosidases, at 612,988 to 613,320 GFF3172 GFF3173 - Transcriptional regulator, IclR family, at 613,353 to 614,159 GFF3173 GFF3174 - Oxidoreductase, GMC family, at 614,266 to 615,906 GFF3174 GFF3175 - Uncharacterized MFS-type transporter, at 615,966 to 617,279 GFF3175 GFF3176 - Two-component transcriptional response regulator, LuxR family, at 617,298 to 617,771 GFF3176
Group Condition GFF3172 GFF3173 GFF3174 GFF3175 GFF3176
complex community Community=arabino-guar; Passage=4 N.D. -3.4 +0.0 +0.1 -0.0
complex community Community=arabino-guar; Passage=4 N.D. -2.2 -0.3 -0.1 +0.1
complex community Community=Locust bean gum; Passage=4 N.D. -1.9 -0.3 +0.0 -0.2
complex community Community=guar; Passage=4 N.D. -1.7 -0.2 -0.0 -0.3
complex community Community=Locust bean gum; Passage=4 N.D. -1.5 -0.2 -0.0 +0.0
complex community Community=Locust bean gum; Passage=4 N.D. -1.4 -0.3 -0.0 +0.1
complex community Community=Kojac gum; Passage=4 N.D. -0.6 +0.0 +0.1 -0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.6 -0.2 +0.0 -0.4
complex community Community=Locust bean gum; Passage=4 N.D. -0.2 -0.2 -0.4 -0.2
vitamin M9 with Supernatant from Cyptococcus N.D. -0.7 -0.2 +0.1 -0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -0.8 -0.1 +0.1 -0.0
vitamin M9 with Supernatant from Cyptococcus N.D. -0.7 -0.1 +0.0 -0.1
vitamin M9 with Supernatant from Cyptococcus N.D. -0.1 -0.3 -0.2 -0.2
complex community Community=Kojac gum; Passage=1 N.D. -0.6 -0.1 +0.0 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. -0.6 -0.1 +0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.4 -0.2 +0.0 -0.1
vitamin M9 with Supernatant from Cyptococcus N.D. -0.5 -0.1 +0.3 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.3 -0.4 +0.1 -0.3
complex community Community=Locust bean gum; Passage=1 N.D. -0.6 +0.1 -0.0 +0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. +0.3 -0.0 -0.1 -0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. +0.3 -0.2 +0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. +0.4 -0.1 +0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.5 -0.2 -0.0 -0.1
complex community Community=guar; Passage=4 N.D. +0.3 +0.1 -0.3 +0.2
complex community Community=arabino-guar; Passage=4 N.D. +0.7 -0.4 +0.3 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. +0.7 -0.2 +0.1 -0.1
complex community Community=guar; Passage=4 N.D. +0.6 +0.2 -0.3 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.7 -0.1 +0.2 -0.3
phage phage_bap4 N.D. +0.3 -0.0 +0.3 -0.0
complex community Community=arabino-guar; Passage=4 N.D. +0.5 -0.2 +0.1 +0.1
remove
GFF3172
plot		 remove
GFF3173
plot		 remove
GFF3174		 remove
GFF3175
plot		 remove
GFF3176
plot