Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3168 and GFF3169 are separated by 10 nucleotidesGFF3169 and GFF3170 overlap by 4 nucleotidesGFF3170 and GFF3171 are separated by 10 nucleotidesGFF3171 and GFF3172 are separated by 202 nucleotides GFF3168 - Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16), at 607,781 to 609,223 GFF3168 GFF3169 - Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3), at 609,234 to 610,754 GFF3169 GFF3170 - hypothetical protein, at 610,751 to 611,548 GFF3170 GFF3171 - Uncharacterized protein conserved in bacteria, at 611,559 to 612,785 GFF3171 GFF3172 - Glycosidases, at 612,988 to 613,320 GFF3172
Group Condition GFF3168 GFF3169 GFF3170 GFF3171 GFF3172
complex community Community=arabino-guar; Passage=4 -2.3 -0.3 N.D. -0.1 N.D.
complex community Community=guar; Passage=4 -2.2 +0.2 N.D. -0.5 N.D.
complex community Community=Locust bean gum; Passage=4 -1.0 +0.0 N.D. -0.9 N.D.
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -1.5 -0.0 N.D. -0.0 N.D.
complex community Community=guar; Passage=4 -0.4 -0.5 N.D. -0.5 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -1.1 -0.1 N.D. -0.1 N.D.
complex community Community=guar; Passage=4 -1.0 -0.3 N.D. +0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.6 -0.1 N.D. -0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.6 -0.1 N.D. -0.1 N.D.
complex community Community=Locust bean gum; Passage=4 -1.2 +0.4 N.D. +0.2 N.D.
complex community Community=arabino-guar; Passage=4 -0.1 -0.2 N.D. -0.3 N.D.
phage phage_bap4 -0.5 +0.0 N.D. -0.1 N.D.
vitamin M9 with Supernatant from Cyptococcus -0.3 +0.1 N.D. -0.3 N.D.
complex community Community=arabino-guar; Passage=4 +1.1 -1.4 N.D. -0.0 N.D.
phage phage_bap4 -0.4 -0.1 N.D. +0.1 N.D.
phage phage_bap4 -0.5 +0.3 N.D. +0.0 N.D.
complex community Community=guar; Passage=4 +0.5 -0.4 N.D. -0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.3 -0.2 N.D. -0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.4 -0.1 N.D. -0.3 N.D.
phage phage_bap4 -0.3 +0.2 N.D. +0.2 N.D.
vitamin M9 with Supernatant from Cyptococcus +0.3 +0.1 N.D. -0.4 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.5 +0.1 N.D. -0.2 N.D.
complex community Community=Locust bean gum; Passage=4 +0.8 -0.1 N.D. -0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.4 +0.2 N.D. -0.0 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL +0.6 +0.1 N.D. -0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.6 +0.1 N.D. -0.0 N.D.
phage phage_bap4 +0.2 +0.3 N.D. +0.2 N.D.
complex community Community=arabino-guar; Passage=4 +0.6 +0.5 N.D. -0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL +0.9 -0.1 N.D. +0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +1.1 -0.1 N.D. +0.0 N.D.
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