Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3152 and GFF3153 overlap by 4 nucleotidesGFF3153 and GFF3154 are separated by 188 nucleotidesGFF3154 and GFF3155 are separated by 77 nucleotidesGFF3155 and GFF3156 are separated by 13 nucleotides GFF3152 - hypothetical protein, at 587,719 to 589,104 GFF3152 GFF3153 - Two-component transcriptional response regulator, LuxR family, at 589,101 to 589,757 GFF3153 GFF3154 - no description, at 589,946 to 591,103 GFF3154 GFF3155 - Gluconolactonase (EC 3.1.1.17), at 591,181 to 592,110 GFF3155 GFF3156 - FIG00441737: hypothetical protein, at 592,124 to 593,281 GFF3156
Group Condition GFF3152 GFF3153 GFF3154 GFF3155 GFF3156
complex community Community=guar; Passage=4 -3.4 +0.5 -0.1 -0.1 -1.2
complex community Community=Locust bean gum; Passage=4 -3.9 +0.2 +0.0 -0.2 -0.1
complex community Community=guar; Passage=4 -3.6 -0.2 +0.6 -0.5 +0.2
vitamin M9 with Supernatant from Cyptococcus -1.8 -0.5 -0.3 -0.2 -0.3
vitamin M9 with Supernatant from Cyptococcus -1.8 -0.7 -0.2 -0.2 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -1.7 -0.6 -0.2 -0.2 -0.2
complex community Community=guar; Passage=4 -2.9 -0.2 +0.5 -0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -1.3 -0.6 -0.3 -0.2 -0.2
complex community Community=arabino-guar; Passage=4 -3.7 +0.7 +0.2 +0.4 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.9 -0.3 -0.5 -0.4 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL -1.4 -0.3 -0.1 -0.1 -0.4
complex community Community=Locust bean gum; Passage=4 -2.2 -0.0 -0.3 +0.0 +0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -1.0 -0.8 -0.1 -0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -1.1 -0.1 -0.2 -0.4 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.5 -0.6 -0.3 -0.2 -0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.6 -0.4 -0.4 -0.4 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -1.1 -0.6 -0.2 +0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.6 -0.5 -0.3 -0.3 -0.3
phage phage_bap4 -1.3 +0.2 -0.6 -0.0 -0.1
no phage control no phage control -1.3 -0.1 -0.3 +0.1 -0.2
phage phage_bap4 -1.5 -0.1 -0.1 +0.3 -0.3
no phage control no phage control -1.7 +0.1 +0.1 -0.1 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL -1.0 +0.2 +0.0 -0.3 -0.3
complex community Community=guar; Passage=4 -1.5 +0.5 +0.1 -0.3 -0.2
vitamin M9 with Supernatant from Cyptococcus -1.1 +0.2 -0.3 +0.3 -0.4
complex community Community=Kojac gum; Passage=4 -1.7 +0.4 +0.5 -0.4 -0.1
complex community Community=arabino-guar; Passage=4 -1.3 +0.2 +0.5 -0.0 -0.4
complex community Community=arabino-guar; Passage=4 -1.4 +0.2 +0.8 +0.2 -0.7
complex community Community=arabino-guar; Passage=4 -1.4 +0.3 +0.8 -0.8 +0.1
complex community Community=Locust bean gum; Passage=4 -2.5 +1.0 +0.8 +0.3 -0.6
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