Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF3143 and GFF3144 overlap by 4 nucleotidesGFF3144 and GFF3145 are separated by 7 nucleotidesGFF3145 and GFF3146 overlap by 4 nucleotidesGFF3146 and GFF3147 overlap by 14 nucleotides GFF3143 - hypothetical protein, at 20,934 to 21,296 GFF3143 GFF3144 - IncF plasmid conjugative transfer pilus assembly protein TraC, at 21,293 to 23,875 GFF3144 GFF3145 - Conjugative transfer protein TraV, at 23,883 to 24,620 GFF3145 GFF3146 - Thiol:disulfide involved in conjugative transfer, at 24,617 to 25,486 GFF3146 GFF3147 - IncF plasmid conjugative transfer pilus assembly protein TraB, at 25,473 to 26,891 GFF3147
Group Condition GFF3143 GFF3144 GFF3145 GFF3146 GFF3147
carbon source Ying_all64 rep A; time point 2 N.D. +0.0 -0.5 -0.1 -0.1
carbon source Ying_all64 rep B; time point 1 N.D. +0.2 -0.0 -0.8 -0.0
carbon source Ying_OrganicAcid7 rep C; time point 2 N.D. -0.2 -0.4 +0.2 -0.2
carbon source Ying_AminoAcid20 rep C; time point 1 N.D. +0.2 +0.3 -0.8 -0.2
carbon source Ying_AminoAcid20 rep A; time point 1 N.D. +0.1 +0.1 -0.6 -0.0
carbon source Ying_AminoAcid20 rep C; time point 2 N.D. -0.3 -0.2 +0.2 -0.1
carbon source Ying_Nucleobase14 rep C; time point 2 N.D. +0.0 -0.1 -0.4 +0.1
carbon source Ying_Others16 rep A; time point 2 N.D. -0.1 -0.1 +0.2 -0.4
carbon source Ying_Others16 rep B; time point 2 N.D. +0.1 -0.2 -0.2 +0.2
carbon source Ying_AminoAcid20 rep A; time point 3 N.D. +0.0 -0.2 +0.4 -0.2
carbon source Ying_Others16 rep A; time point 3 N.D. -0.2 -0.2 +0.2 +0.2
carbon source Ying_OrganicAcid7 rep B; time point 2 N.D. +0.2 -0.0 -0.3 +0.3
carbon source Ying_Others16 rep B; time point 3 N.D. +0.2 -0.1 -0.3 +0.3
carbon source Ying_all64 rep C; time point 2 N.D. +0.0 +0.3 +0.1 -0.3
carbon source Ying_sugar7 rep B; time point 2 N.D. -0.1 +0.1 +0.3 -0.1
carbon source Ying_Nucleobase14 rep C; time point 1 N.D. +0.2 +0.6 +0.0 -0.4
carbon source Ying_OrganicAcid7 rep B; time point 1 N.D. +0.1 +0.4 -0.1 -0.1
carbon source Ying_all64 rep A; time point 1 N.D. +0.4 +0.2 -0.4 +0.2
carbon source Ying_all64 rep A; time point 3 N.D. +0.2 -0.2 +0.3 +0.2
carbon source Ying_all64 rep B; time point 2 N.D. +0.1 +0.2 -0.1 +0.2
carbon source Ying_AminoAcid20 rep B; time point 2 N.D. +0.1 +0.4 +0.2 -0.2
carbon source Ying_Others16 rep C; time point 3 N.D. +0.1 -0.0 +0.6 -0.1
carbon source Ying_sugar7 rep A; time point 2 N.D. +0.2 +0.1 +0.3 +0.1
carbon source Ying_AminoAcid20 rep A; time point 2 N.D. +0.2 +0.0 +0.3 +0.1
carbon source Ying_Others16 rep A; time point 1 N.D. +0.2 +0.2 +0.2 +0.1
carbon source Ying_Nucleobase14 rep B; time point 2 N.D. +0.2 +0.5 +0.0 +0.0
carbon source Ying_Others16 rep C; time point 1 N.D. +0.2 +0.1 +0.4 +0.1
carbon source Ying_OrganicAcid7 rep A; time point 3 N.D. +0.2 +0.4 +0.3 +0.0
carbon source Ying_all64 rep C; time point 3 N.D. +0.0 +0.1 +0.4 +0.4
carbon source Ying_OrganicAcid7 rep C; time point 3 N.D. +0.2 +0.0 +0.6 +0.3
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