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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF3134 and GFF3135 are separated by 144 nucleotides
GFF3135 and GFF3136 are separated by 134 nucleotides
GFF3136 and GFF3137 are separated by 33 nucleotides
GFF3137 and GFF3138 are separated by 189 nucleotides
GFF3134 - hypothetical protein, at 3,204,487 to 3,204,873
GFF3134
GFF3135 - nuclease (SNase-like) protein, at 3,205,018 to 3,205,575
GFF3135
GFF3136 - hypothetical protein, at 3,205,710 to 3,206,753
GFF3136
GFF3137 - hypothetical protein, at 3,206,787 to 3,207,563
GFF3137
GFF3138 - Translation elongation factor LepA, at 3,207,753 to 3,209,558
GFF3138
Group
Condition
GFF3134
GFF3135
GFF3136
GFF3137
GFF3138
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.8
-0.4
-0.1
+0.1
-0.9
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.3
-0.1
-0.1
-0.1
-1.8
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.5
-0.3
-0.2
+0.2
-0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.3
+0.2
-0.2
-0.9
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
-0.0
-0.1
-0.0
-1.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.2
-0.0
-0.0
-0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.1
-0.1
-0.0
-0.6
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
-0.3
+0.0
+0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
+0.1
-0.2
-0.1
-0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.1
-0.0
+0.0
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
-0.1
+0.2
+0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
-0.1
-0.1
-0.0
+0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
-0.2
+0.2
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
-0.0
-0.1
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.0
+0.0
+0.2
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
+0.2
+0.1
+0.2
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.2
+0.0
-0.1
+0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.4
-0.1
-0.1
+0.0
+0.3
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