Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3129 and GFF3130 are separated by 24 nucleotidesGFF3130 and GFF3131 are separated by 4 nucleotidesGFF3131 and GFF3132 are separated by 41 nucleotidesGFF3132 and GFF3133 are separated by 222 nucleotides GFF3129 - no description, at 558,643 to 559,086 GFF3129 GFF3130 - hypothetical protein, at 559,111 to 559,554 GFF3130 GFF3131 - VgrG protein, at 559,559 to 562,732 GFF3131 GFF3132 - T6SS component Hcp, at 562,774 to 563,256 GFF3132 GFF3133 - hypothetical protein, at 563,479 to 564,624 GFF3133
Group Condition GFF3129 GFF3130 GFF3131 GFF3132 GFF3133
complex community Community=guar; Passage=4 N.D. +0.3 -0.1 N.D. -2.7
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -0.9 +0.0 N.D. -0.8
phage phage_bap4 N.D. -0.8 +0.0 N.D. -0.6
complex community Community=Locust bean gum; Passage=4 N.D. -1.3 +0.4 N.D. -0.4
vitamin M9 with Supernatant from Cyptococcus N.D. -0.6 -0.0 N.D. -0.7
phage phage_bap4 N.D. -0.9 -0.0 N.D. -0.3
vitamin M9 with Supernatant from Cyptococcus N.D. -0.6 -0.0 N.D. -0.5
complex community Community=guar; Passage=4 N.D. +0.0 -0.5 N.D. -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. -0.5 +0.3 N.D. -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.4 +0.1 N.D. -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. -0.4 +0.2 N.D. -0.5
complex community Community=guar; Passage=4 N.D. +0.6 -0.5 N.D. -0.7
complex community Community=Locust bean gum; Passage=4 N.D. -1.4 +0.6 N.D. +0.2
vitamin M9 with Supernatant from Cyptococcus N.D. -0.0 +0.3 N.D. -0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. -0.5 +0.4 N.D. -0.3
no phage control no phage control N.D. -0.7 -0.1 N.D. +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.1 +0.2 N.D. -0.7
no phage control no phage control N.D. -0.7 -0.2 N.D. +0.7
complex community Community=arabino-guar; Passage=4 N.D. +0.2 +0.1 N.D. -0.5
phage phage_bap4 N.D. -0.8 +0.1 N.D. +0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. +0.3 +0.3 N.D. -0.7
complex community Community=Locust bean gum; Passage=4 N.D. -0.4 -0.1 N.D. +0.7
phage phage_bap4 N.D. -0.6 +0.3 N.D. +0.6
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.6 +0.2 N.D. -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. +0.7 +0.0 N.D. -0.2
complex community Community=guar; Passage=4 N.D. +1.0 +0.1 N.D. -0.5
complex community Community=Locust bean gum; Passage=4 N.D. -0.4 +0.1 N.D. +1.0
complex community Community=arabino-guar; Passage=4 N.D. +1.1 -0.5 N.D. +0.2
complex community Community=arabino-guar; Passage=4 N.D. +1.4 -0.2 N.D. -0.2
complex community Community=arabino-guar; Passage=4 N.D. +0.1 +0.3 N.D. +0.7
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