Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_15990	PS417_15995	PS417_16000	PS417_16005	PS417_16010
soil	soil sample 2; outgrowth in LB	+0.2	+0.2	-1.2	-6.4	-0.3
soil	soil sample 4; outgrowth in LB	-0.4	+0.1	-0.1	-6.2	-0.3
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.4	-0.3	-0.3	-5.6	+0.1
soil	soil sample 8; outgrowth in LB	-0.5	-0.1	-0.2	-4.3	-0.3
soil	soil sample 6; outgrowth in LB	-0.3	+0.5	-1.4	-3.9	-0.1
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.0	+0.0	-0.0	-5.0	-0.1
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	-0.4	+0.1	+0.1	-4.5	-0.6
soil	soil sample 7; outgrowth in LB	-0.6	-0.3	+0.2	-4.5	+0.1
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	+1.1	-0.2	+0.3	-6.1	+0.3
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.2	+0.2	+0.3	-5.6	+0.1
rhizosphere	rhizosphere sample 8; outgrowth in LB	-0.3	+0.5	-1.7	-3.0	-0.0
soil	soil sample 5; outgrowth in LB	+0.0	-0.7	-0.2	-3.6	+0.0
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.1	+0.2	-1.3	-3.7	+0.2
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.3	+0.2	-0.3	-4.3	+0.1
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.2	+0.4	+0.2	-4.2	-0.4
soil	soil sample 3; outgrowth in LB	+0.3	+1.1	-0.8	-4.0	-0.3
nitrogen source	Uridine (N)	-0.0	+0.2	-0.5	-3.2	-0.1
nitrogen source	Cytidine (N)	+0.2	+0.1	-0.8	-2.7	-0.2
seeds	Growth on radish seeds for 72 hours	+0.4	-0.5	+0.0	-2.9	-0.3
seeds	Growth on radish seeds for 72 hours	+0.9	-0.7	-1.2	-2.2	+0.1
seeds	Growth on radish seeds for 72 hours	+0.4	-0.7	+0.2	-3.1	+0.2
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.6	-0.1	+0.3	-3.6	-0.2
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.1	+0.2	+0.3	-3.4	+0.0
root	root sample 6; outgrowth in LB	-0.1	+1.0	-0.2	-2.8	-0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.4	-0.2	+0.9	-3.2	-0.5
rhizosphere	rhizosphere sample 2; outgrowth in LB	-0.2	+0.7	+0.6	-2.9	-0.2
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.1	+0.8	+1.8	-3.9	-0.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days	+0.3	+0.3	+0.8	-2.5	+0.0
carbon source	L-Valine (C)	+0.0	-0.0	+1.8	-1.9	-0.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.0	+0.6	+2.9	-1.4	-0.1